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qh_9_scaffold_100_13

Organism: QH_9_Halococcus_66_26

near complete RP 30 / 55 MC: 6 BSCG 26 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: 9523..10074

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 183.0
  • Bit_score: 316
  • Evalue 2.10e-83
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 183.0
  • Bit_score: 316
  • Evalue 1.50e-83
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 182.0
  • Bit_score: 245
  • Evalue 1.50e-62

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGCGACTGTTCGTGAGCGTCGATCTCGACGGGCTCGCCGGGGAGATCGCCGATGTCCAGGAAGCGATCGCCGACGCGAGCGGGGTCCGACGCACCGATCCCGGGAACGTCCACGTGACGCTGAAATTTCTCGGGGAAGTCGAAGACGAGCGAGTTCCGGACCTCGCGGCGGCACTGGCTGAGGCGATCGACGGGGCAGGTGTCGATTCGTTTACTGCTGCGTTCGGCGGGCTCGGCGCGTTCCCGAGCGAGGAGTACATCCGCGTTCTCTGGGTCGGCGTTTGTGAGGGTGGCGACGAGCTTGCCAGACTCCACGAGGCGATCGAGGACCGAACTACCGAGATGGGGTTCGATCCCGCCGATCACGAGTTCACGCCGCACGCGACGATCGCCAGAATGGACCACGCTGGCGGCAAGGAGCGGGTCCAGCGCGCGCTCCGTGAAACCGATCGCACGGTCGGAACACTCGACGTGAACGAGGTTCGGCTGACCGAGAGCGTGCTCGATGACGACGGACCGGAGTACACCACCGTCAAGCGATTCGAGTTGTGA
PROTEIN sequence
Length: 184
MRLFVSVDLDGLAGEIADVQEAIADASGVRRTDPGNVHVTLKFLGEVEDERVPDLAAALAEAIDGAGVDSFTAAFGGLGAFPSEEYIRVLWVGVCEGGDELARLHEAIEDRTTEMGFDPADHEFTPHATIARMDHAGGKERVQRALRETDRTVGTLDVNEVRLTESVLDDDGPEYTTVKRFEL*