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qs_1_scaffold_1280_17

Organism: QS_1_Actinobacteria_72_13

near complete RP 47 / 55 BSCG 47 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: comp(15224..15991)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036C51C6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 249.0
  • Bit_score: 303
  • Evalue 1.80e-79
FliA/WhiG family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 252.0
  • Bit_score: 298
  • Evalue 2.10e-78
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:EFC84896.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 253.0
  • Bit_score: 298
  • Evalue 8.10e-78

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGAGCAACGCCTCGTCGTACACGCGCGAGGACACCAAGGAGCTGTTCCGCGAGCTTCGCGAGACCGGCGACCCCGAGGTGCGCGAGACCCTGGCGCGGCTGCACCTGCCGTTGGTGGAATACCTCGCGCGGCGCTTCAAGGACCGCGGCGAGCCCATCGAGGACCTGGTGCAGGTGGGATCGGTGGGCCTGCTGAAGGCGATCGACCGCTTCGACGTCGATCGCGGCGTGGAGTTCTCCACCTACGCCACCCCCACGATCGTCGGTGAGCTCAAGCGCTACTTCCGCGACAAGGGCTGGGCCGTGCGGGTGCCGCGGCGCCTGCAGGAGCTGTCGCTGCGGCTGAACAAGATCGTGGCCCAGCTGACCCAAGAGCTCGGGCGCAGCCCCACCGTGTCGGAGCTGGCACAGGCGGCCGAGGTCGGCGAGGAGGAGGTCCTGGAAGCCCTGGAGTCCGGGCAGGCGTACTCCACGGCCTCGCTGGACGCCCCCTCCGGCGAGGAGGACGACGCCCCGGGGCGCGTGGAGCGCATGGGCGACGAGGACGTCCAGTTGGAGAACCTGGAGTACTTCGCGTCCCTGGCCCCGCTGATCCAGCAGCTGCCCGAGCGCGAGCGCACCATCCTGTACCTGCGGTTCTTTCAGGGGCTGACCCAGTCGGGGATCGCCGAGGAAGTGGGCATCAGCCAGATGCACGTGTCCCGGCTGCTGTCGCGCATCCTGGGCTATCTGCGCGACGGCATGGTGGGCGCGGACCAGGAGGCCTAG
PROTEIN sequence
Length: 256
MSNASSYTREDTKELFRELRETGDPEVRETLARLHLPLVEYLARRFKDRGEPIEDLVQVGSVGLLKAIDRFDVDRGVEFSTYATPTIVGELKRYFRDKGWAVRVPRRLQELSLRLNKIVAQLTQELGRSPTVSELAQAAEVGEEEVLEALESGQAYSTASLDAPSGEEDDAPGRVERMGDEDVQLENLEYFASLAPLIQQLPERERTILYLRFFQGLTQSGIAEEVGISQMHVSRLLSRILGYLRDGMVGADQEA*