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qs_1_scaffold_3028_7

Organism: QS_1_Actinobacteria_72_13

near complete RP 47 / 55 BSCG 47 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: comp(7259..10903)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1609133 species="Bacteria; A similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 999.99
  • Bit_score: 1073
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NG14_KITSK similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 999.99
  • Bit_score: 1068
  • Evalue 0.0
mfd; putative transcription-repair-coupling factor similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 999.99
  • Bit_score: 1068
  • Evalue 0.0

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Taxonomy

Streptomyces sp. NRRL S-495 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3645
TTGCCGGCGCTGACCCGGCACGCGACCATGGCGCGGCCGATGGCTGCCTGTGTCGCCGGTCCGCTGGCCGCCCTGGTGGACGCCGGCCGCGACCGTCTCGCCGATGAGCTGCAGCCCGGCCGGTTGACGGTCGGGCCGGCGGCGCGCCCCTACGCGCTCGCCCTGTTGGCCGAGCGCGCCGCGCCGCTGTTGGTGGTTACTGCCACCGACCGCGACGTTGACGCGGTAGTCGACGACCTCGGGGCGTTTCTCGGCGAGGACGCCGTGGCGGCCTTTCCCGCGTGGGAGACGCTGCCCCACGAGCGGCTCAGCCCCCAGCCGGCGACGGTGGGCCAACGCTTGGCGGTGCTCCACCGCCTGCGCAAGCCCGAGGAGGGCGACAGCCCACCCGAGGCCGGGCGGGCCACAGGCGAGGCCAGGCGCGCAGGCCTGGCGGCGCTCGTCGCGCCGGTTCGGGCCCTGCTGCAGCCCATGGACCCCCGCTTGGCCGAGCGCGACCCGCTGGTTGTCGACGGAGCCTACGCCGGCGGCTTGGACGGGCTGGTACACGCCCTGGCCACGCTGGGCTACACGCGCAGCCGCACGGTGGAGCAGCGCGGGGAGTTCGCCGTGCGCGGCGGGCTGGTCGACGTGTTTCCCACCGCCGCTGAGCTGCCGGTGCGCATCGAGTTCTTCGGCGACGACGTCGACAGCCTGCGGCGCTTCCACGTCGCCGATCAGCGCAGCGAGGACCATCTCGAGCGGGCGGTCATCGATCCGGCCCGCGAGGTCGTGCTGGACGCCGACACCGCCGACACCGCCCGGCGCGTCGCCGCGCAGGTCCCCGAGCTCGCCGACGAGCTGGGCCGGCTGGCCGACGGCGTGGCCTTCGAGGGCATGGAGGCGTTGGTCACCGCCATCCACCCGCGCCCAGCCCACCTTCCCGACTTCCTGCCCGCCGGGGCCGGGCTGGCCGTCATCGACGCCCCCCAGGTCGCCGAGCGCGCCGAGCAGCTGCGCGCCGAGGCCCGCGAGCTGCTGGTGGCCGGCTGGACCTCCACCGGAGAGGACACATCGGCCGGCCACGACCCGGGCGCGACCGGCGAGGACACCTCGGCCGGCCACGGCCCGGGCGCGACCGGCGTGAGAGGGCTGGCGCGGCTGCTCAGCGGGATCGCGGACGCAAGCGATGAGTCCCGCGACGAGGTCGGCTTCGCCGACTGGGACACGGTGCGCCAGGGCAGCGGCGAGCCGCAGTGGGAGCTCAGCGCGTTTGGCTCGGCCAGCCGCGACGTGCCGGCTACGGCGTGGGACTCCTTTCGTGGCGACATGGCCGGGGTGGCCGGCACGGTGCGCCGCCTGGCGGGACAAGGGGCCACGGTGGTGCTGACCGCTGCGGGTCACGGGTCGGCGCGTCGCTTGGCAGAGGTGCTGCGCGACGAGGGCGTGGCCGCCCCCGTCGTGACCCGGCTGGAGCCGCCCGAGGGCGGGCGCGTCGCGGTCGTGCCCTCCACGCTGCGCGAGGGCTTTCACAGCGACGAGCTCGGCGTGGCGCTGCTGGGCGAATGGGACCTGTTCGGTCCGCGCCGCTCGCGCTCCACGCGCCGGCTGCCCAGCCGGCGTAGCGCGACCGACGCCGTGCTCGATCTCGAGGCTGGTGACTACGTGGTCCACGCCACCCATGGCGTGGGCCGCTACGCCGGCGTGGTCACCCGCACGCTGGGCGGGCCCACCACGGCGGTGGGCGGCGTCAGCGGTCAGGTCACCCGCGACTACGTCGTGGTCGAGTACGCCGGGGGCGACACGCTGTACGTGCCCGGCGACCAGGTGGATGCGCTGACCAAGTACGTCGGCGGCGAGCAGCCGGCGGTCATGCGCCTGGGCGGCGGCGATTGGCAGCGGGCTCGGCACAAGGTCAAGGAGTCGGTCAAGGAGATGGCCGGCGAGCTGGTCCGGCTGTACCAGGCGCGCATGCACGCCACCGGCCGGGCCTTCGGGCCGGACACGCCGTGGCAGCGCGAGCTGGAGGAGGCCTTCCCCCACACCGAGACCGAGGATCAGCTCGGTGCCATCGACGACGTCAAGGCCGACCTCGAGGCGCATCAGCCCATGGACCGCCTGGTGTGTGGCGACGTCGGCTATGGCAAGACCGAGATCGCGGTACGCGCGGCGGCCAAGGCGGTTTTCGACGGCGCCCAGGTGGCGGTGTTGGTGCCCACCACGCTGCTGGCCCAGCAGCACGGCGAGACGTTCACCGAGCGCTTCAGTGGCTTTCCGGTCGAGGTGCGTGTGCTGTCGCGCTTCGCCAGCCCCCGCGAGCAGAAGCGGACCCTGGACGGGCTGGCGGCGGGCACTGTTGACATCGTGGTGGGCACCCACCGGCTGTTGGGCTCGGACGTGGCCTTCAAGGACCTCGGGCTGATGGTGGTCGACGAGGAGCAGCGCTTCGGCGTGGCCCACAAGGAGCAGCTCAAGCGCCTGCGCACCAACGTGGACGTGTTGACCATGACCGCCACCCCCATCCCGCGCACCATGGAGTTGGCCATCACCGGCGTGCGCGACCTCTCCACGATCGACACGCCCCCCGAGGACCGCCAGCCGGTGGTCACCCACGTGGGTGAGTACGACGAGGCCACCGCGGCGCTGGCGGTGCGTCGTGAGCTGCTGCGCGAGGGCCAGGTCTTTTGGGTGCACAACCAGGTGGACACCATCGACGCGGTGACCGCCCGGGTTCGCGAGCTCGTTCCCGGCGCGCGGGTGGCGATGGCCCACGGGCGGATGAGCGAGGATGAGCTTGAACAGGTCATGGTGAGCTTCTGGAACCGCGAGCACGACGTGCTGGTGTCGACCACCATCGTCGAGTCCGGGCTGGACATCCCCAACGCCAACACGCTGATCGTGGAGCGCACCGACCTGATGGGCTTGGCCCAGATCTATCAGCTGCGCGGGCGCATCGGGCGCTCGGCCCGGCGGGGCTACGCCTACCTGTTCTTTCCCCAGGCGCGGGCCATGACCGAACAGGCCCACAAGCGCCTGGAGGCCGTGGCCGAGCACACCGGTCTGGGCTCGGGCATGTCGATTGCGCTGAAGGATTTGGAGATCCGCGGCGCCGGCGACCTGCTGTCGGGCGATCAGTCCGGCCATGTCGCCAGCGTGGGCATGGAGGAGTACGGGCGGATCATGGCCGAGGCCGTCACCGAGCTCACCGACGGCGGCGAGCCCGAGGCCGAGACCGAGCCCGAGATCCGCATCGACTTGCCGGTGGACGCCCACCTGCCGGCCGACTACATCGACGACGAGGGCCTGCGCCTGCAAGCCTACAAGCGGGTGGCCAGCGTCCGTGACAGCGCGGGGGTCAAGGCCGCCCGGGCCGAGCTCGTCGACCGCTTCGGGCCGCTGCCCGAGCCCGCCGAGCGGCTGCTGGCCGTGGCAGCGCTGCGCGCCGCGGCGCGCCGCTGGGGCATCACGGCCATCTCCACCACGCCGCGGCGCACCGCCCGGGTGGAGCCAGTGGTGCTGTCCGACGCTCAGGAGGTGCGCCTGGCCCGTCGCTTTCCCCGTGCGCGCTACAACGCGGCGGCCAGCGCCCTGGAGTTGCCGCTTCCCTCCAGCGGCGATCCGGTGGCCGCCCTCGCCGGCGACCTCAAGGCGCTGCTGGCGCCGTAA
PROTEIN sequence
Length: 1215
LPALTRHATMARPMAACVAGPLAALVDAGRDRLADELQPGRLTVGPAARPYALALLAERAAPLLVVTATDRDVDAVVDDLGAFLGEDAVAAFPAWETLPHERLSPQPATVGQRLAVLHRLRKPEEGDSPPEAGRATGEARRAGLAALVAPVRALLQPMDPRLAERDPLVVDGAYAGGLDGLVHALATLGYTRSRTVEQRGEFAVRGGLVDVFPTAAELPVRIEFFGDDVDSLRRFHVADQRSEDHLERAVIDPAREVVLDADTADTARRVAAQVPELADELGRLADGVAFEGMEALVTAIHPRPAHLPDFLPAGAGLAVIDAPQVAERAEQLRAEARELLVAGWTSTGEDTSAGHDPGATGEDTSAGHGPGATGVRGLARLLSGIADASDESRDEVGFADWDTVRQGSGEPQWELSAFGSASRDVPATAWDSFRGDMAGVAGTVRRLAGQGATVVLTAAGHGSARRLAEVLRDEGVAAPVVTRLEPPEGGRVAVVPSTLREGFHSDELGVALLGEWDLFGPRRSRSTRRLPSRRSATDAVLDLEAGDYVVHATHGVGRYAGVVTRTLGGPTTAVGGVSGQVTRDYVVVEYAGGDTLYVPGDQVDALTKYVGGEQPAVMRLGGGDWQRARHKVKESVKEMAGELVRLYQARMHATGRAFGPDTPWQRELEEAFPHTETEDQLGAIDDVKADLEAHQPMDRLVCGDVGYGKTEIAVRAAAKAVFDGAQVAVLVPTTLLAQQHGETFTERFSGFPVEVRVLSRFASPREQKRTLDGLAAGTVDIVVGTHRLLGSDVAFKDLGLMVVDEEQRFGVAHKEQLKRLRTNVDVLTMTATPIPRTMELAITGVRDLSTIDTPPEDRQPVVTHVGEYDEATAALAVRRELLREGQVFWVHNQVDTIDAVTARVRELVPGARVAMAHGRMSEDELEQVMVSFWNREHDVLVSTTIVESGLDIPNANTLIVERTDLMGLAQIYQLRGRIGRSARRGYAYLFFPQARAMTEQAHKRLEAVAEHTGLGSGMSIALKDLEIRGAGDLLSGDQSGHVASVGMEEYGRIMAEAVTELTDGGEPEAETEPEIRIDLPVDAHLPADYIDDEGLRLQAYKRVASVRDSAGVKAARAELVDRFGPLPEPAERLLAVAALRAAARRWGITAISTTPRRTARVEPVVLSDAQEVRLARRFPRARYNAAASALELPLPSSGDPVAALAGDLKALLAP*