ggKbase home page

DolZOral124_scaffold_12369_1

Organism: DOLZORAL124_Rhodobacterales_66_9

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(1..1782)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1577895 species="Bacteria; Proteobacteria; Al similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 605.0
  • Bit_score: 755
  • Evalue 5.60e-215
Ribonuclease E n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQT6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 608.0
  • Bit_score: 745
  • Evalue 5.40e-212
ribonuclease similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 593.0
  • Bit_score: 711
  • Evalue 2.40e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leisingera sp. ANG-M1 → Leisingera → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1782
GTGCACCCGAGGAACATGTCCAAGAAAATGCTCATCGACGCCACCCACGCGGAAGAAACCCGCGTTGTCGTGGTCGACGGCAACAAGGTCGAGGAATTCGACTTTGAATCGGAAAACAAGCGCCCCTTAGCCGGAAACATCTATCTCGCCAAGGTCACCCGCGTGGAGCCCTCGCTCCAGGCGGCCTTTGTCGATTACGGCGGCAATCGCCACGGGTTTCTGGCGTTTTCGGAAATCCACCCCGATTACTACCAGATCCCGGTGGCCGACCGCGAAGCGCTGCTTGAGGAAGAGCGCGCCTATGCCGAGGCGATGGCCGCCGAGGAAGAGGACCGCGAGAAGAAAAAGGCCGCGCGCGGGCGCCGGTCGCGCACGCGGTCGCGCTCCAGAGCGGCTTCGGTCGCGTCGGATGACGCGGTGCTGACCGCCGAGGCCGAGGCGCGCGGACCGGGCGCCGCGGAGGAAAACGGAGACCAGACCGGAGACGGTACCGGCGAGGAAAGGATCCGTGCGCCCGAAGGCATGGAGGTGATCGACCTCGACCCGGAATTCGACGACGAAGGCTTTTCGCCGATGGAACGGGTCGGGGAAACGCCGGTGGAAGAGCCGCAGAACGGTGCGGAGACTGCCGAAGCCGAAGCCACTGCCGAAACCAATGGCGCGCAACAGCTTGCCTCCGGCGAGGCGGGGAAGGCCGGGGCCGGCGACTTGCCCGAAACGTCGGACGAGGCCGGCTCGGATGCGGGCGCGGATGCGCCGGCAAGCCCGGTCACGGCCGCCGGGGAAGCCGGAGAAGCCGGGGACGGCGCAGGAGACGAAACGGCGCAAACGTCCCTTCCCGCCGCGGAGGCCGCGGCCGGCACCGGGGAGACGGCGGAGCCGACCGGGACGCAAACCGCAGATGCCGGGTCCGGCGAAACCGGCGATGCGCCCGGCGAAGACGATGAGGCGCAGGACGATTCCGATGAGGAACATCGCGATCACGGGATCGAGGATGTGGCCGACGAGGACGTCTCCGAAGAAATCCGCCCGCTCCGCAAGCCGCGGCCGAAAAAGTACAAGATCCAGGAAGTGGTCAAGGTCCGCCAGATCCTGCTGGTCCAGGTCGTCAAGGAAGAGCGCGGCAACAAGGGCGCCGCGCTGACCACCTATCTCAGCCTTGCGGGCCGCTATTGCGTGCTCATGCCCAACACCGCCCGCGGCGGCGGCATCTCGCGCAAGATCACCAACGCCGCCGACCGCAAGAAGCTCAAGACCATCGCCGACGGCATCGACGTGCCGAAGGGCGCGGGGCTCATTGTGCGCACCGCCGGCGCCAAGCGCACCAAGGCCGAAATCAAGCGCGACTACGAATATCTTCAGCGGCTCTGGGAAGAGATCCGCACGCTCACGCTCAAATCCATCGCGCCGGCGAAAATCTACGAGGAAGGCGACCTCATCAAGCGGTCGATCCGCGATCTCTACTCGCGCGAGATCGACGAAGTGCTGGTGGAAGGCCATCGCGGTTACCGCACCGCCAAGGACTTCATGAAGATGATCATGCCGTCCCATGCCAAGAACGTGAAGCAGTACCAGGACGCGCTGCCGCTGTTCGCCCGCTATCAGGTCGAAAGCTACCTCAGTTCGATGTTCAACCCGGTGGTGCAACTCAAATCCGGCGGCTACATCGTCATCGGCGTGACCGAAGCGCTGGTGGCGATCGACGTCAACTCCGGCCGCGCCACCAAGGAAGGCTCGATCGAGGAGACCGCGCTCAAGACCAACCTTGAAGCCGCCGAAGAG
PROTEIN sequence
Length: 594
VHPRNMSKKMLIDATHAEETRVVVVDGNKVEEFDFESENKRPLAGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPVADREALLEEERAYAEAMAAEEEDREKKKAARGRRSRTRSRSRAASVASDDAVLTAEAEARGPGAAEENGDQTGDGTGEERIRAPEGMEVIDLDPEFDDEGFSPMERVGETPVEEPQNGAETAEAEATAETNGAQQLASGEAGKAGAGDLPETSDEAGSDAGADAPASPVTAAGEAGEAGDGAGDETAQTSLPAAEAAAGTGETAEPTGTQTADAGSGETGDAPGEDDEAQDDSDEEHRDHGIEDVADEDVSEEIRPLRKPRPKKYKIQEVVKVRQILLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKTIADGIDVPKGAGLIVRTAGAKRTKAEIKRDYEYLQRLWEEIRTLTLKSIAPAKIYEEGDLIKRSIRDLYSREIDEVLVEGHRGYRTAKDFMKMIMPSHAKNVKQYQDALPLFARYQVESYLSSMFNPVVQLKSGGYIVIGVTEALVAIDVNSGRATKEGSIEETALKTNLEAAEE