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qs_1_scaffold_5664_6

Organism: QS_1_Bacteroidetes_Order_II__Incertae_sedis_64_9

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(8252..8971)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 239.0
  • Bit_score: 416
  • Evalue 3.30e-113
DNA-directed RNA polymerase subunit beta n=1 Tax=Salisaeta longa RepID=UPI0003B5308F similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 239.0
  • Bit_score: 418
  • Evalue 6.10e-114
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 239.0
  • Bit_score: 416
  • Evalue 6.60e-114

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 720
AAGCTCGCCAAAGTGTACGTCGCCAAGAAGCGCAAAATTCAGGTGGGCGACAAGATGGCCGGGCGGCATGGCAACAAGGGCGTCATCGCCAAAGTGGTGCCGGAAGAGGACATGCCGTTTCAGAAAGACGGCACGCCCGTCGACATCTGCCTGAACCCGCTCGGCGTGCCCAGCCGCATGAACCTCGGCCAGATTTTCGAGACGCTGCTCGGCTGGGCCGGCGACAAGAAAGACGTGAAGTACTCGACGCCGGTCTTCGACGGCGCTTCGATGGACGAAATCACCGATGAGCTTGAGGCGCAGGGCTTGCCCACTGACGGGCGCGAGCAGCTTTACGACGGGCGCACCGGCGAGCCGTTCGACGAGAAGACGACCGTCGGCCAGATTTACATGCTCAAGCTCTCGCACCTTATCGAAGACAAGATCCACGCACGTTCCATCGGCCCGTATAGTTTGATTACGCAGCAGCCGCTCGGCGGCAAGGCGCAGTTCGGCGGGCAGCGCCTCGGGGAGATGGAGGTGTGGGCGCTCTACGCTTACGGCGCGAGCCACACGCTCCAAGAGATGCTTACCGTCAAGTCGGACGACGTGCAGGGCCGCTCCAAAGCCTACGAGACCATCGTGAAGGGGGAGAACCTGCCTGAAAGCGGCACGCCCGAAAGCTTCAACGTGCTCGTGCGCGAGCTGCAGGGCCTCGGTCTCAAGGTAACGCTCGATTAG
PROTEIN sequence
Length: 240
KLAKVYVAKKRKIQVGDKMAGRHGNKGVIAKVVPEEDMPFQKDGTPVDICLNPLGVPSRMNLGQIFETLLGWAGDKKDVKYSTPVFDGASMDEITDELEAQGLPTDGREQLYDGRTGEPFDEKTTVGQIYMLKLSHLIEDKIHARSIGPYSLITQQPLGGKAQFGGQRLGEMEVWALYAYGASHTLQEMLTVKSDDVQGRSKAYETIVKGENLPESGTPESFNVLVRELQGLGLKVTLD*