ggKbase home page

qs_1_scaffold_378_12

Organism: QS_1_Halobacteriales_67_19

near complete RP 37 / 55 MC: 18 BSCG 27 / 51 MC: 7 ASCG 32 / 38
Location: comp(8306..9763)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 485.0
  • Bit_score: 837
  • Evalue 1.20e-239
tRNA-splicing ligase RtcB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 485.0
  • Bit_score: 837
  • Evalue 8.60e-240
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 486.0
  • Bit_score: 825
  • Evalue 7.30e-237

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1458
ATGACCACCTACGAAGCCGGCGACGTCACGCTCCACAAGGTGCGTGAGTACGTCTGGGAGATCCCGCAGACAGGCGAGATGCGCGCTCCGGCCCGCGTCCTCGCCAGCGAGACCCTGCTGGACCAGATCGCCCAAGACAAGACGCTCGAACAGCTCAAAAACTCCACCCACCTGCCTGGCGTCCGCAAGTACAGCCTCTGTATGCCCGACGGCCACCAGGGATACGGCTTCCCGGTCGGCGGCGTCGCGGGTATCGACGCCGAGGACGGCTGTATTTCCCCGGGAACGGTCGGCTACGACATAAATTGCGGCGTTAGAATGATGAAGACAAACCTGGCCTACGACGACGTGCGGGGCCGCGAGGAGGAACTCGTCGACGCCCTGTTCGCGAACATTCCCTCGGGGCTCGGCGGGGGCGGCGTCGTCGAGGGCGACGTCGACACCGTCGAGGCCATCCTCGACCGGGGGATGGAGTGGGCCCTCGAAGCGGGCTACGCCGTCGAGGAGGACCTCGCCCACTGCGAAGACGAGGGCGTGCGCCACGACAGCGACCCCGCGAAGGTCTCCCAGAAGGCCAAGGACCGGGGCAAGAACCAGATCGGGAGCCTCGGCTCGGGCAACCACTTCTTAGAGGTCCAGCGCGTGACCGACACGTACCTCGACGACGTGGCCGACGCCTACGGACTGGAGGAGGGCCAGATCGTCGTCCTCATCCACTGCGGCAGCCGGGGGTTGGGCCACCAGGTCTGCACCGATTACCTCCGGGACATCGAGCAGGCCCACGCCGGCCTGCTCGGCCGGCTCCCCGACAAGGAGCTGGCGGCCGCGCCCGCCGGCAGCCAGCTCGCGGCAGACTACTACGACGCGATGTGCGCGTCGATCAACTTCGCGTGGGTCAACCGCCAGCTCATCATGCACCGCACCCGGAAGGTGTTCGAGAAGGTGTTCGGCAGCGACTGGGAGTCGCTGGGCATGGACCTGCTGTACGACGTGGCCCACAACATCGCTAAGAAGGAGATCCACGACGTGGACGGCGAGGAACGCGAGCTGTACGTCCACCGGAAGGGCGCGACCCGAGCGTTCCCCGCGGGCCATCCCGAACTGCCCGGCGCGTACCTCGACGTCGGCCAGCCCATCCTCATCCCCGGCAGCATGGGCGCGGGCAGCTACGTCCTGCGGGGCGGCGAGGCCTCGATGGCCGAGACGTTCGGCTCGACCGCCCACGGCGCCGGCCGGACGATGAGCCGCACGCAGGCCAAGAACGACTACTGGGGCGGCGACGTGCAGGACGAGCTCGAACAGGAGCACATCTACGTGAAGGCCCAGAGCGGCGCGACGGTCGCCGAGGAGGCCCCGGGCGTCTACAAGGACGTCGACGAGGTGGTCCGCGTCTCTGACGCGCTGGGCATCGGCGACAAGGTCGCCCGGACCTATCCGGTCTGCAACATCAAGGGATAG
PROTEIN sequence
Length: 486
MTTYEAGDVTLHKVREYVWEIPQTGEMRAPARVLASETLLDQIAQDKTLEQLKNSTHLPGVRKYSLCMPDGHQGYGFPVGGVAGIDAEDGCISPGTVGYDINCGVRMMKTNLAYDDVRGREEELVDALFANIPSGLGGGGVVEGDVDTVEAILDRGMEWALEAGYAVEEDLAHCEDEGVRHDSDPAKVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDTYLDDVADAYGLEEGQIVVLIHCGSRGLGHQVCTDYLRDIEQAHAGLLGRLPDKELAAAPAGSQLAADYYDAMCASINFAWVNRQLIMHRTRKVFEKVFGSDWESLGMDLLYDVAHNIAKKEIHDVDGEERELYVHRKGATRAFPAGHPELPGAYLDVGQPILIPGSMGAGSYVLRGGEASMAETFGSTAHGAGRTMSRTQAKNDYWGGDVQDELEQEHIYVKAQSGATVAEEAPGVYKDVDEVVRVSDALGIGDKVARTYPVCNIKG*