ggKbase home page

qs_1_scaffold_8000_3

Organism: QS_1_Halobacteriales_68_44

partial RP 6 / 55 MC: 1 BSCG 9 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(1016..1792)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 258.0
  • Bit_score: 396
  • Evalue 4.40e-108
DNA-directed RNA polymerase subunit D {ECO:0000255|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00320};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 258.0
  • Bit_score: 396
  • Evalue 2.20e-107
DNA-directed RNA polymerase subunit D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPOD_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 258.0
  • Bit_score: 396
  • Evalue 1.60e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 777
ATGAGCGAGGAGTACGAGGTAACGTTCATCGACCGCGGCGACCGGAGCGCCCGGTTCCTCGTTCGCGGCGTCACGCCCGCCTTCGCCAACGGCGTCCGGCGTGCTATCCTCGCGGACGTGCCGACGCTCTCGATCGACTCCGTGCGGGTCATCGAGAACTCGTCAGTGATGTTCGACGAGCAGATCGCGCTCCGGCTCGGTCTCGTCCCGCTGACGACGCCGGACGACTACCGCCCGGACGAGGCCGTCACGCTGGCCATCGACGTCGAGGGACCGGCGACCGCCTACTCGGGCGACCTGGTCTCGAGCGACGAGCAGGTTCAGCCGGCCGAGGAGAACGTGCCCATCATCGAACTCAAGGAGGGCCAGCGGCTGGAGCTGGAGGCCGACGCGGCGCTGGGCCGCGGCAAGGACCACGCCAAACACCAGGGCGGGGTCGCGGTCGGCTACCGGCACCTCCAGCGGGTGGAGGTCGTCGGCGAAACGGGCGAGTTCGAGGAGGAGGAAGCCGAAATCATCCGCGGCGTCATCGAGGAGGGCGCCGCCGAACACGCCGACGCTGACGCCGAGAACGGCGACCTCGTGCCCGCAGAGTCGTTCGACAACGACCTCGGTGGGCGGTACCCCGGCAAGGAGGTCCGGGTCGAGGACGTGCCGAACGCCTTCGTCTTCAGCGTCGAGAGCGACGGGTCGGTTGCCGTCGACGAACTCGTGCTGAAGGCGGTCGACTCGCTGGAATCGCGCGCGAACGAACTCGAAGAAGCGGTCCAACTGTAA
PROTEIN sequence
Length: 259
MSEEYEVTFIDRGDRSARFLVRGVTPAFANGVRRAILADVPTLSIDSVRVIENSSVMFDEQIALRLGLVPLTTPDDYRPDEAVTLAIDVEGPATAYSGDLVSSDEQVQPAEENVPIIELKEGQRLELEADAALGRGKDHAKHQGGVAVGYRHLQRVEVVGETGEFEEEEAEIIRGVIEEGAAEHADADAENGDLVPAESFDNDLGGRYPGKEVRVEDVPNAFVFSVESDGSVAVDELVLKAVDSLESRANELEEAVQL*