ggKbase home page

qs_1_scaffold_3384_4

Organism: QS_1_Halococcus_68_71

partial RP 4 / 55 BSCG 2 / 51 ASCG 12 / 38
Location: comp(3706..4257)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 181.0
  • Bit_score: 316
  • Evalue 2.70e-83
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 181.0
  • Bit_score: 316
  • Evalue 1.90e-83
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 180.0
  • Bit_score: 260
  • Evalue 3.50e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGCGACTGTTCGTGAGCGTCGATCTCGACGGGCTCGCCGAGGAGGTCGCGACCGTTCAGGAAACGGTCGCCGACGCGAGCGGGGTTCGGCTCACCGATCCCGGGAACGTCCACGTGACGCTGAAGTTCCTCGGCGAGGTCGACGAAGAGCGGATTCCGGACCTCACGGGGGAGGTAGCCGACGGGATCGACGAAACGGGTGTCGGACCGTTCAGGGCCGCCTTCGGCGGGCTCGGCGCGTTCCCGAGCGAGGAGTACATCCGCGTGCTCTGGATCGGCGTCCGCGAGGGTGGCGAGGAGCTGACCAGACTCCACGAGGCGATCGAGAACCGAACGACCGAGATGGGGTTCGATCCCGCCGACCACGAGTTCACGCCGCACGCGACGATCGCCCGAATGGATCACGCCGGCGGCAAGGCGGAGGTCCAGCGCGCGCTCCGCGAGACCGATCCCACCGTCGGCACGCTCGACGTGAGCGAGGTCCGGCTGACCGAGAGCACACTCGACGACGACGGACCGGAGTACACCACCGTCGAACGGTTCGCGTTCTGA
PROTEIN sequence
Length: 184
MRLFVSVDLDGLAEEVATVQETVADASGVRLTDPGNVHVTLKFLGEVDEERIPDLTGEVADGIDETGVGPFRAAFGGLGAFPSEEYIRVLWIGVREGGEELTRLHEAIENRTTEMGFDPADHEFTPHATIARMDHAGGKAEVQRALRETDPTVGTLDVSEVRLTESTLDDDGPEYTTVERFAF*