ggKbase home page

qs_2_scaffold_7567_4

Organism: QS_2_Salinibacter_ruber_64_27

partial RP 41 / 55 MC: 5 BSCG 35 / 51 MC: 3 ASCG 9 / 38 MC: 1
Location: comp(2307..2573)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 88.0
  • Bit_score: 158
  • Evalue 3.50e-36
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] id=24659238 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 89.0
  • Bit_score: 157
  • Evalue 5.50e-36
def; peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 88.0
  • Bit_score: 158
  • Evalue 6.90e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 267
GTGCGGGAGGCGGTGACGCGGCCCGAGCGGGTCCGGATGCGCTATCTCGACCGCACCTTTGAGGAGCAGGAGATCGAGGCCGGACACATGCTGGCCCGGGTCCTGCAACACGAGCGCGATCACCTCGACGGCATTCTCTTTACCGACTACCTCAGCAGTTTCCGGAAGCGGCTGCTCCAGCGCCCCCTGCGGGAGATGGTCAACGGAGAAGTCGAAGCCGACTACCCGCTTGTGACGCAGGACGACGAGCAGGTGCCTGCGCGATAA
PROTEIN sequence
Length: 89
VREAVTRPERVRMRYLDRTFEEQEIEAGHMLARVLQHERDHLDGILFTDYLSSFRKRLLQRPLREMVNGEVEADYPLVTQDDEQVPAR*