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qs_2_scaffold_23_25

Organism: QS_2_Halobacteriales_65_45

near complete RP 33 / 55 MC: 6 BSCG 29 / 51 MC: 1 ASCG 36 / 38 MC: 2
Location: comp(24472..25479)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7V0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 325.0
  • Bit_score: 597
  • Evalue 7.90e-168
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 325.0
  • Bit_score: 597
  • Evalue 1.10e-167
transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 325.0
  • Bit_score: 589
  • Evalue 6.10e-166

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1008
ATGTACACGCGCTACTACTACTTAAGTGCAATGACACGGCCTACCCGTCAGCGCGAGCGCGAGCGTCAGCAAGGGGGTTCAACGGGGGAACGGGAACAGGAGCAAGAGGGAGTACGTGATTGTCCGGAGTGCGAGTCGAAGAACTTGGTCAAGAGTTCCGATCGCGGCGAACTCGTCTGTGAGGACTGCGGCCTAGTCGTCGAGGAGAGCACGATCGATCCAGGCCCGGAGTGGCGCGCGTTCAATCATTCGGAACGCCAGCAGAAGTCCCGCGTGGGTGCGCCGACCACCCAGACGATGCACGACAAGGGCCTGACCACGACCATCGATTGGAAGGACAAGGACGCCTACGGGCGGTCGATCTCCTCGAAGAAGCGCTCCCAGATGCACCGGCTTCGGAAATGGCAGGAACGCATTCGGACGAAGGACGCCGGCGAGCGAAACCTGCAGTTCGCCCTCTCGGAGATCGATCGGATGGCGTCGGCGTTAGGCGTTCCCCGGTCGGTCCGGGAGGTCGCCTCGGTTATCTATCGGCGCGCGCTCGCCGACGACCTCATCCGTGGCCGCTCGATCGAGGGCGTTGCGACGTCCGCGCTGTATGCCGCCTGTCGGAAGGAGGGCATCCCGCGTTCGTTGGAAGAGATCTCGGAGGTCTCGCGCGTCGAGCGAAAGGAGATCGGTCGTACATATCGGTATATCTCCCAGGAACTCGGCCTCGAAATGAGACCCGTCGATCCGAAGAAGTACGTCCCCCGCTTCTGTTCGGAGCTGTCCTTGTCCGAGGAAGTCCAATCGAAGGCAAACGACATCATCGAGACCACCGCTGAGGAGGGCCTCTTATCCGGTAAATCCCCGACGGGCTACGCCGCTGCGGCGATCTACGCCGCCTCGTTGCTCTGCAACGAGAAAAAGACCCAGCGCGAGGTCGCCGACGTCGCTCAGGTGACCGAAGTCACCATCCGCAATCGCTACCAGGAACAGATCGAGGCAATGGGCATCCACAGCTAA
PROTEIN sequence
Length: 336
MYTRYYYLSAMTRPTRQRERERQQGGSTGEREQEQEGVRDCPECESKNLVKSSDRGELVCEDCGLVVEESTIDPGPEWRAFNHSERQQKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALADDLIRGRSIEGVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDPKKYVPRFCSELSLSEEVQSKANDIIETTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIHS*