ggKbase home page

ACD3_6_19 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ABC transporter rbh KEGG
DB: KEGG
58.6 570.0 625 1.70e-176 phe:Phep_2233
ABC transporter similarity KEGG
DB: KEGG
58.6 570.0 625 1.70e-176 phe:Phep_2233
Putative ABC transport system, ATP-binding protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E806_9SPHI (db=UNIREF evalue=2.0e-151 bit_score=540.0 identity=56.03 coverage=98.7719298245614) similarity UNIREF
DB: UNIREF
56.03 98.77 540 2.00e-151 phe:Phep_2233
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=173) iprscan interpro
DB: TMHMM
null null null null phe:Phep_2233
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33) iprscan interpro
DB: TMHMM
null null null null phe:Phep_2233
seg (db=Seg db_id=seg from=127 to=165) iprscan interpro
DB: Seg
null null null null phe:Phep_2233
seg (db=Seg db_id=seg from=236 to=256) iprscan interpro
DB: Seg
null null null null phe:Phep_2233
seg (db=Seg db_id=seg from=279 to=296) iprscan interpro
DB: Seg
null null null null phe:Phep_2233
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75) iprscan interpro
DB: TMHMM
null null null null phe:Phep_2233
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296) iprscan interpro
DB: TMHMM
null null null null phe:Phep_2233
transmembrane_regions (db=TMHMM db_id=tmhmm from=125 to=147) iprscan interpro
DB: TMHMM
null null null null phe:Phep_2233
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261) iprscan interpro
DB: TMHMM
null null null null phe:Phep_2233
ATP-BINDING CASSETTE TRANSPORTER (db=HMMPanther db_id=PTHR19242 from=5 to=566 evalue=3.9e-121) iprscan interpro
DB: HMMPanther
null null null 3.90e-121 phe:Phep_2233
LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBA (db=HMMPanther db_id=PTHR19242:SF91 from=5 to=566 evalue=3.9e-121) iprscan interpro
DB: HMMPanther
null null null 3.90e-121 phe:Phep_2233
ABC transporter transmembrane region (db=superfamily db_id=SSF90123 from=5 to=316 evalue=3.2e-57 interpro_id=IPR011527 interpro_description=ABC transporter, transmembrane domain, type 1 GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021), Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626), Biological Process: transmembrane transport (GO:0055085)) iprscan interpro
DB: superfamily
null null null 3.20e-57 phe:Phep_2233
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=293 to=568 evalue=3.9e-51) iprscan interpro
DB: Gene3D
null null null 3.90e-51 phe:Phep_2233
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=307 to=546 evalue=2.1e-48) iprscan interpro
DB: superfamily
null null null 2.10e-48 phe:Phep_2233
ABC_membrane (db=HMMPfam db_id=PF00664 from=18 to=284 evalue=1.7e-28 interpro_id=IPR001140 interpro_description=ABC transporter, transmembrane domain GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021), Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626), Biological Process: transmembrane transport (GO:0055085)) iprscan interpro
DB: HMMPfam
null null null 1.70e-28 phe:Phep_2233
ABC_tran (db=HMMPfam db_id=PF00005 from=369 to=490 evalue=6.4e-14 interpro_id=IPR003439 interpro_description=ABC transporter-like GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887)) iprscan interpro
DB: HMMPfam
null null null 6.40e-14 phe:Phep_2233
ABC_TRANSPORTER_2 (db=ProfileScan db_id=PS50893 from=328 to=560 evalue=19.548 interpro_id=IPR003439 interpro_description=ABC transporter-like GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887)) iprscan interpro
DB: ProfileScan
null null null 1.95e+01 phe:Phep_2233
ABC_TM1F (db=ProfileScan db_id=PS50929 from=17 to=297 evalue=42.698 interpro_id=IPR017940 interpro_description=ABC transporter integral membrane type 1) iprscan interpro
DB: ProfileScan
null null null 4.27e+01 phe:Phep_2233
sli:Slin_1094 ABC transporter related protein alias=ACD3_2080.29821.67_19,ACD3_2080.29821.67G0019,ACD3_C00006G00019 id=49562 tax=ACD3 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 1098 0.0 phe:Phep_2233
sli:Slin_1094 ABC transporter related protein Tax=ACD3 UNIPROT
DB: UniProtKB
98.6 569.0 995 2.30e-287 ggdbv1_49562