Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA binding S1 protein | similarity |
KEGG
DB: KEGG |
41.3 | 409.0 | 287 | 7.80e-75 | srb:P148_SR1C001G0661 |
RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 (db=UNIREF evalue=8.0e-63 bit_score=244.0 identity=37.65 coverage=79.5620437956204) | similarity |
UNIREF
DB: UNIREF |
37.65 | 79.56 | 244 | 8.00e-63 | srb:P148_SR1C001G0661 |
seg (db=Seg db_id=seg from=358 to=410) | iprscan |
interpro
DB: Seg |
null | null | null | null | srb:P148_SR1C001G0661 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=267 to=381 evalue=7.4e-30 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.40e-30 | srb:P148_SR1C001G0661 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=203 to=285 evalue=3.7e-23 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.70e-23 | srb:P148_SR1C001G0661 |
no description (db=HMMSmart db_id=SM00316 from=287 to=358 evalue=4.1e-22) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.10e-22 | srb:P148_SR1C001G0661 |
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=302 to=321 evalue=3.3e-21 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.30e-21 | srb:P148_SR1C001G0661 |
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=114 to=130 evalue=3.3e-21 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.30e-21 | srb:P148_SR1C001G0661 |
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=26 to=44 evalue=3.3e-21 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.30e-21 | srb:P148_SR1C001G0661 |
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=341 to=359 evalue=3.3e-21 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.30e-21 | srb:P148_SR1C001G0661 |
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=226 to=247 evalue=3.3e-21 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 3.30e-21 | srb:P148_SR1C001G0661 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=284 to=360 evalue=3.4e-19 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.40e-19 | srb:P148_SR1C001G0661 |
no description (db=HMMSmart db_id=SM00316 from=204 to=272 evalue=1.8e-18) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.80e-18 | srb:P148_SR1C001G0661 |
S1 (db=HMMPfam db_id=PF00575 from=285 to=358 evalue=5.4e-18 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.40e-18 | srb:P148_SR1C001G0661 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=201 to=274 evalue=6.4e-15 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.40e-15 | srb:P148_SR1C001G0661 |
S1 (db=HMMPfam db_id=PF00575 from=203 to=272 evalue=1.6e-13 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-13 | srb:P148_SR1C001G0661 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=108 to=202 evalue=3.8e-12 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.80e-12 | srb:P148_SR1C001G0661 |
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=200 to=324 evalue=6.0e-12) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 6.00e-12 | srb:P148_SR1C001G0661 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=24 to=117 evalue=2.5e-07 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.50e-07 | srb:P148_SR1C001G0661 |
S1 (db=HMMPfam db_id=PF00575 from=23 to=93 evalue=0.00011 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.10e-04 | srb:P148_SR1C001G0661 |
no description (db=HMMSmart db_id=SM00316 from=24 to=93 evalue=0.15) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.50e-01 | srb:P148_SR1C001G0661 |
no description (db=HMMSmart db_id=SM00316 from=109 to=189 evalue=2.5) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.50e+00 | srb:P148_SR1C001G0661 |
S1 (db=ProfileScan db_id=PS50126 from=111 to=189 evalue=9.604 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 9.60e+00 | srb:P148_SR1C001G0661 |
S1 (db=ProfileScan db_id=PS50126 from=26 to=93 evalue=11.989 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.20e+01 | srb:P148_SR1C001G0661 |
S1 (db=ProfileScan db_id=PS50126 from=206 to=272 evalue=17.434 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.74e+01 | srb:P148_SR1C001G0661 |
S1 (db=ProfileScan db_id=PS50126 from=289 to=358 evalue=22.788 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.28e+01 | srb:P148_SR1C001G0661 |
RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 Tax=ACD3 |
UNIPROT
DB: UniProtKB |
98.8 | 410.0 | 750 | 1.20e-213 | ggdbv1_49607 |