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ACD3_15_15 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
pseudouridine synthase similarity KEGG
DB: KEGG
46.3 231.0 194 4.00e-47 dal:Dalk_1419
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=11 to=233 evalue=9.9e-53) iprscan interpro
DB: HMMPanther
null null null 9.90e-53 dal:Dalk_1419
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=11 to=233 evalue=9.9e-53) iprscan interpro
DB: HMMPanther
null null null 9.90e-53 dal:Dalk_1419
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=72 to=225 evalue=2.7e-32 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: HMMTigr
null null null 2.70e-32 dal:Dalk_1419
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=64 to=235 evalue=5.0e-30 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
null null null 5.00e-30 dal:Dalk_1419
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=7 to=65 evalue=5.7e-09) iprscan interpro
DB: superfamily
null null null 5.70e-09 dal:Dalk_1419
S4 (db=HMMPfam db_id=PF01479 from=8 to=40 evalue=4.0e-07 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 4.00e-07 dal:Dalk_1419
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=72 to=141 evalue=5.1e-07 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
null null null 5.10e-07 dal:Dalk_1419
no description (db=HMMSmart db_id=SM00363 from=7 to=65 evalue=0.00042 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 4.20e-04 dal:Dalk_1419
S4 (db=ProfileScan db_id=PS50889 from=7 to=72 evalue=10.841 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.08e+01 dal:Dalk_1419
pseudouridine synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] alias=ACD3_1803.19723.84G0015,ACD3_1803.19723.84_15,ACD3_C00015G00015 id=49783 tax=ACD3 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 498 1.50e-138 dal:Dalk_1419
pseudouridine synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] Tax=ACD3 UNIPROT
DB: UniProtKB
97.9 240.0 420 2.20e-114 ggdbv1_49783