Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
pseudouridine synthase | similarity |
KEGG
DB: KEGG |
46.3 | 231.0 | 194 | 4.00e-47 | dal:Dalk_1419 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=11 to=233 evalue=9.9e-53) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 9.90e-53 | dal:Dalk_1419 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=11 to=233 evalue=9.9e-53) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 9.90e-53 | dal:Dalk_1419 |
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=72 to=225 evalue=2.7e-32 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.70e-32 | dal:Dalk_1419 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=64 to=235 evalue=5.0e-30 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.00e-30 | dal:Dalk_1419 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=7 to=65 evalue=5.7e-09) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.70e-09 | dal:Dalk_1419 |
S4 (db=HMMPfam db_id=PF01479 from=8 to=40 evalue=4.0e-07 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.00e-07 | dal:Dalk_1419 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=72 to=141 evalue=5.1e-07 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.10e-07 | dal:Dalk_1419 |
no description (db=HMMSmart db_id=SM00363 from=7 to=65 evalue=0.00042 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.20e-04 | dal:Dalk_1419 |
S4 (db=ProfileScan db_id=PS50889 from=7 to=72 evalue=10.841 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.08e+01 | dal:Dalk_1419 |
pseudouridine synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] alias=ACD3_1803.19723.84G0015,ACD3_1803.19723.84_15,ACD3_C00015G00015 id=49783 tax=ACD3 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 498 | 1.50e-138 | dal:Dalk_1419 |
pseudouridine synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] Tax=ACD3 |
UNIPROT
DB: UniProtKB |
97.9 | 240.0 | 420 | 2.20e-114 | ggdbv1_49783 |