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ACD3_16_18

Organism: ACD3

near complete RP 47 / 55 MC: 12 BSCG 46 / 51 MC: 3 ASCG 0 / 38
Location: comp(18095..18373)

Top 3 Functional Annotations

Value Algorithm Source
cas2; CRISPR-associated endoribonuclease Cas2 similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 92.0
  • Bit_score: 82
  • Evalue 6.50e-14
CRISPR_Cas2 (db=HMMPfam db_id=PF09827 from=1 to=77 evalue=1.0e-15 interpro_id=IPR019199 interpro_description=Virulence-associated protein D / CRISPR associated protein Cas2) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-15
TTP0101/SSO1404-like (db=superfamily db_id=SSF143430 from=1 to=82 evalue=3.7e-12) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.70e-12

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Notes

CRISPR repeat/spacer locus probably 14645 - 17830 bp region Jill Banfield (11/15/12)

Taxonomy

ACD3 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGCTCATAGTCACTTATGACATCCATGATGATAAATTACGCACAAAATTTTCAAAATTTTTGAAAAAGTATTGAAGAAGACTTCAATATAGTGTTTTTGAAATAAAGAATTCTGAAAGGATTATAAACATCGTAAAAAAGCAGGTTGAAGAAAAATTTGAGCCAAAATTCACCGGAGCTGACAGTATTCTGATTCTGCCTTTTACAAAAGTCGATAGAGAAAAGATCATAAGATATTGACAGCCCGCCATGGAAGAAAAAGAAATCCTTTTTTTGTAA
PROTEIN sequence
Length: 93
MLIVTYDIHDDKLRTKFSKFLKKYGRRLQYSVFEIKNSERIINIVKKQVEEKFEPKFTGADSILILPFTKVDREKIIRYGQPAMEEKEILFL*