Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
50S ribosomal protein L1 | similarity |
KEGG
DB: KEGG |
48.4 | 225.0 | 218 | 1.90e-54 | gya:GYMC52_0096 |
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=3 to=227 evalue=3.1e-97 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 3.10e-97 | gya:GYMC52_0096 |
Ribosomal protein, L1p/L1a/L10e/organellar L1 types (db=HMMPIR db_id=PIRSF002155 from=1 to=227 evalue=2.6e-83 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 2.60e-83 | gya:GYMC52_0096 |
50S RIBOSOMAL PROTEIN L1P (db=HMMPanther db_id=PTHR23105:SF5 from=21 to=225 evalue=1.7e-71) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.70e-71 | gya:GYMC52_0096 |
RIBOSOMAL PROTEIN L7AE FAMILY MEMBER (db=HMMPanther db_id=PTHR23105 from=21 to=225 evalue=1.7e-71) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.70e-71 | gya:GYMC52_0096 |
Ribosomal_L1 (db=HMMPfam db_id=PF00687 from=15 to=221 evalue=6.3e-65 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.30e-65 | gya:GYMC52_0096 |
Ribosomal protein L1 (db=superfamily db_id=SSF56808 from=6 to=227 evalue=5.7e-64 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.70e-64 | gya:GYMC52_0096 |
no description (db=Gene3D db_id=G3DSA:3.30.190.20 from=2 to=226 evalue=4.2e-42 interpro_id=IPR016094 interpro_description=Ribosomal protein L1, 2-layer alpha/beta-sandwich GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.20e-42 | gya:GYMC52_0096 |
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1 alias=ACD3_1163.15871.59G0009,ACD3_C00020G00009,ACD3_1163.15871.59_9 id=49933 tax=ACD3 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 452 | 8.70e-125 | gya:GYMC52_0096 |
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;" |
UNIPROT
DB: UniProtKB |
98.2 | 227.0 | 424 | 1.10e-115 | K2FCH9_9BACT |