Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
UPI0001D5B34C related cluster n=1 Tax=unknown RepID=UPI0001D5B34C (db=UNIREF evalue=0.0 bit_score=1053.0 identity=47.1 coverage=89.5659432387312) | similarity |
UNIREF
DB: UNIREF |
47.1 | 89.57 | 1053 | 0.0 | tro:trd_0991 |
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) | rbh |
KEGG
DB: KEGG |
48.0 | 999.99 | 982 | 1.10e-283 | tro:trd_0991 |
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) | similarity |
KEGG
DB: KEGG |
48.0 | 999.99 | 982 | 1.10e-283 | tro:trd_0991 |
seg (db=Seg db_id=seg from=682 to=695) | iprscan |
interpro
DB: Seg |
null | null | null | null | tro:trd_0991 |
coiled-coil (db=Coil db_id=coil from=1147 to=1168 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | tro:trd_0991 |
DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 (db=HMMPanther db_id=PTHR20856 from=402 to=1169 evalue=0.0 interpro_id=IPR015712 interpro_description=DNA-directed RNA polymerase, subunit 2 GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: ribonucleoside binding (GO:0032549)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | tro:trd_0991 |
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=47 to=1148 evalue=0.0) | iprscan |
interpro
DB: superfamily |
null | null | null | 0.0 | tro:trd_0991 |
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR20856:SF3 from=402 to=1169 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | tro:trd_0991 |
rpoB: DNA-directed RNA polymerase, beta subu (db=HMMTigr db_id=TIGR02013 from=45 to=1144 evalue=0.0 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | tro:trd_0991 |
RNA_pol_Rpb2_6 (db=HMMPfam db_id=PF00562 from=632 to=1069 evalue=5.9e-124 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.90e-124 | tro:trd_0991 |
no description (db=Gene3D db_id=G3DSA:3.90.1100.10 from=47 to=680 evalue=2.1e-109) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.10e-109 | tro:trd_0991 |
no description (db=Gene3D db_id=G3DSA:2.40.270.10 from=748 to=1055 evalue=1.7e-57) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.70e-57 | tro:trd_0991 |
RNA_pol_Rpb2_1 (db=HMMPfam db_id=PF04563 from=63 to=422 evalue=7.4e-27 interpro_id=IPR007644 interpro_description=RNA polymerase, beta subunit, protrusion GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.40e-27 | tro:trd_0991 |
RNA_pol_Rpb2_3 (db=HMMPfam db_id=PF04565 from=426 to=494 evalue=2.6e-24 interpro_id=IPR007645 interpro_description=RNA polymerase Rpb2, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.60e-24 | tro:trd_0991 |
RNA_pol_Rpb2_7 (db=HMMPfam db_id=PF04560 from=1072 to=1145 evalue=1.7e-23 interpro_id=IPR007641 interpro_description=RNA polymerase Rpb2, domain 7 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.70e-23 | tro:trd_0991 |
RNA_pol_Rpb2_2 (db=HMMPfam db_id=PF04561 from=196 to=367 evalue=7.1e-23 interpro_id=IPR007642 interpro_description=RNA polymerase Rpb2, domain 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.10e-23 | tro:trd_0991 |
no description (db=Gene3D db_id=G3DSA:2.40.50.100 from=681 to=745 evalue=1.3e-10) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.30e-10 | tro:trd_0991 |
RNA_pol_Rpb2_45 (db=HMMPfam db_id=PF10385 from=562 to=622 evalue=3.9e-06 interpro_id=IPR019462 interpro_description=DNA-directed RNA polymerase, beta subunit, external 1 domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.90e-06 | tro:trd_0991 |
RNApol_bact_RpoB (db=HAMAP db_id=MF_01321 from=49 to=1147 evalue=10.811 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 1.08e+01 | tro:trd_0991 |
slp:Slip_2245 DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] alias=ACD3_C00020G00002,ACD3_1163.15871.59G0002,ACD3_1163.15871.59_2 id=49935 tax=ACD3 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=BD1-5 organism_desc=BD1-5 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 2459 | 0.0 | tro:trd_0991 |
slp:Slip_2245 DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=ACD3 |
UNIPROT
DB: UniProtKB |
98.2 | 999.99 | 2179 | 0.0 | ggdbv1_49935 |