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ACD3_45_11 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
seg (db=Seg db_id=seg from=62 to=73) iprscan interpro
DB: Seg
null null null null srb:P148_SR1C001G0753
SIGMA70_2 (db=PatternScan db_id=PS00716 from=39 to=65 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
null null null 0.0 srb:P148_SR1C001G0753
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=16 to=59 evalue=7.9e-12 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 7.90e-12 srb:P148_SR1C001G0753
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=86 evalue=1.3e-10 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.30e-10 srb:P148_SR1C001G0753
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=14 to=80 evalue=1.6e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
null null null 1.60e-10 srb:P148_SR1C001G0753
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=19 to=31 evalue=1.7e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
null null null 1.70e-09 srb:P148_SR1C001G0753
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=39 to=54 evalue=1.7e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
null null null 1.70e-09 srb:P148_SR1C001G0753
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=54 to=65 evalue=1.7e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
null null null 1.70e-09 srb:P148_SR1C001G0753
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;" UNIPROT
DB: UniProtKB
98.9 351.0 660 1.40e-186 K2G294_9BACT
hypothetical protein KEGG
DB: KEGG
34.8 339.0 183 1.40e-43 srb:P148_SR1C001G0753