ggKbase home page

ACD3_50_20

Organism: ACD3

near complete RP 47 / 55 MC: 12 BSCG 46 / 51 MC: 3 ASCG 0 / 38
Location: comp(22036..23649)

Top 3 Functional Annotations

Value Algorithm Source
glycoside hydrolase family protein (db=KEGG evalue=3.0e-08 bit_score=63.9 identity=26.53 coverage=22.3048327137546) similarity KEGG
DB: KEGG
  • Identity: 26.53
  • Coverage: 22.3
  • Bit_score: 63
  • Evalue 3.00e-08
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=109 to=364 evalue=5.4e-17 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.40e-17

Lists

This feature is not on any list.

Notes

breaks down cell wall of "algae" Jill Banfield (11/15/12)
family 26- putative plant degradation kelly wrighton (11/15/12)
plant degradation- family 26 kelly wrighton (11/15/12)
family 26- plant degradation kelly wrighton (11/15/12)

Taxonomy

ACD3 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 1614
ATGAAAAAATTTCTTTCCATACTTCTTTTGCTTGTCATTTTTCCAACTTCAACTCTGGCTTTTCAGGATTATTTCCTTTTTTGACTGAGATTGCAGGACAATGAATATGATATAGCTAAGAAAATAGAATCAAATTATAACATAAAGGTTCCACTCATTTCAGTAATCTATGATGATTTCAATAAGGGTGAGATTTATAAATTAGCAACCACTTTCAAAGAATTATGAAAAGATAGGGTATATCATGTAGATGTAAACCCATTCTGATATAGTTTAAAAGACCTCCTCAATGACCCAAAGCATCATTGATGGGAAACGAAATATAGAACACTTTTCAGATTGATAAAGAAATATGACGTAAAAGTCATATTCAGGTTCCTTCATGAAATGAATTGATGATGGTATAGTTGGTCGTCTGATCCTGTTAATTTCCCGATTTTCTGGAAGATGGTATGGAAGTGGAGCAGGGAAGAGTGACTTGATAGGTCAAATATACTCTTTGACTATTCAATAAACAGTCAGGATCTGCCTGTTGCGCCTGGTTTTTTCGTAGATCAGTTATCTGAAGTTGTAAATTGCACCCAAGATAAGAAAAAAGAAACATGATGCCTTACTTTTGAAGATTATTATCCAGGGGATGAATATGTTGATATAATGGGCGTGACTATTTATAATTGGTGAAAATGAGCTAGGGCAGAGAAGTGGGCCTCATGGAGAACTCCCATGGAAGTTCTGAATGAACCTTGATATTGGACATTTGACAGGATGAAAAAATTTGGCAAACCTATATTCATCGATGAAGCATGAACAACTAGTGTCAATATAGATTGAGAATTTGATAATGCTAAATTGATAGAAAGCTATAACAGCACCCACATCTGACAGCCATGAATTCCTGCATTTTGAACTAAAGACAAAAATAAATGGATATCGCAATTGACTGAAATATATACCGACCCTCAGGTAATCGGATGAGCATACTTCAACGCTGATGTTACATATGGATTTACTGATAGAAGTAAAATATGAGAGCTGGATTGGACTGCAATCGATCCAGATAAGAATTTTGCATATCCTTCGCTCATACGTCTTTTTAATGACAAGAGATTGCTTAGAGATCCTACATCTTATTTCAATCCGTCTAAAAATATTCTTGAAAGTTGAGAATGGATAACTGATATTGAATTGAATGAAATCCAGGCTTTCATCTCAAAATATATGGTTTTCCAATATTGAAATCTATCTGCACATCCCGAATTCTCCTGAACTCTAAAGTATCCGAAATACCAACTGCAGCTTATGAAATATATATGAGATGATCCTGTCCTTTGTCCTTTTGTTTCCGCTAAATTCCCTAAGATAAAATGTTCTCTTAAAGTCGATAAGACTACATTAAACGATAAGAAAAAAATATTCGGCGCACTTATAAGGAGAATTGATTCAAATCCTGAATCTTTAACTAATTGGTGAATCTGGGAGCAAACCCAAACATTGAAATGATTTTTGAATATAAATTTATCCAATTTAGGCGAGAATTCCCAAAGCAGGAAATCATTAGAAAATATGGTTGCATATCTTGATTTTTATGAAAACAGATATCTTGATCTGAGGTAA
PROTEIN sequence
Length: 538
MKKFLSILLLLVIFPTSTLAFQDYFLFGLRLQDNEYDIAKKIESNYNIKVPLISVIYDDFNKGEIYKLATTFKELGKDRVYHVDVNPFGYSLKDLLNDPKHHGWETKYRTLFRLIKKYDVKVIFRFLHEMNGGWYSWSSDPVNFPIFWKMVWKWSREEGLDRSNILFDYSINSQDLPVAPGFFVDQLSEVVNCTQDKKKETGCLTFEDYYPGDEYVDIMGVTIYNWGKGARAEKWASWRTPMEVLNEPGYWTFDRMKKFGKPIFIDEAGTTSVNIDGEFDNAKLIESYNSTHIGQPGIPAFGTKDKNKWISQLTEIYTDPQVIGGAYFNADVTYGFTDRSKIGELDWTAIDPDKNFAYPSLIRLFNDKRLLRDPTSYFNPSKNILESGEWITDIELNEIQAFISKYMVFQYGNLSAHPEFSGTLKYPKYQLQLMKYIGDDPVLCPFVSAKFPKIKCSLKVDKTTLNDKKKIFGALIRRIDSNPESLTNWGIWEQTQTLKGFLNINLSNLGENSQSRKSLENMVAYLDFYENRYLDLR*