ggKbase home page

ACD3_50_16

Organism: ACD3

near complete RP 47 / 55 MC: 12 BSCG 46 / 51 MC: 3 ASCG 0 / 38
Location: comp(19378..19929)

Top 3 Functional Annotations

Value Algorithm Source
transcription termination/antitermination factor NusG similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 171.0
  • Bit_score: 153
  • Evalue 4.60e-35
no description (db=Gene3D db_id=G3DSA:3.30.70.940 from=9 to=122 evalue=3.3e-27 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.30e-27
N-utilization substance G protein NusG, N-terminal domain (db=superfamily db_id=SSF82679 from=9 to=122 evalue=3.6e-26 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.60e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium (gcode 4) → Bacteria

Sequences

DNA sequence
Length: 552
ATGTTTTCTACATTAACTCAAAAAGATTGAGAATGGTATGTCATAAGAGTGATATCATGAACTGAAGAGAATGTAAGGCAATCGCTTCTGCAAAGAAGAGAAGCCTTCAATCTTGAAGATTATATCCTAGAAGTATTCGTACCTACGCACGATAGTGTTTCAATCAGAGCAGGATGAGTGAAAGTAAGAAAAAAGAAGAATATTTTTCCTGGTTACATACTTGTTAAAATGGTTGTAACAAACGAAAGCTGGTATATTGTAAGAAATACTCCGAACGTTACTTGATTCCTATGAGCATGAACTGTACCGGTTCCTGTAAGGTGAGAAGAATTGGAGCAATTGAAATGAGTTCTTGAACAAAAAAGCGAAGAATACAAGACAAGTTTCAAAATAGGCGATTACGTTGTCATCTCAACATGACCATTTGATTGATCTGAGTGAAAAATAATTGAAATCAACGAAGAAAAAGGCCTTCTGAAAGTCAATGTCAATATTCTTGGCAGAGATACTCCTGTTGAGCTTGATTTTGCAAATGTAAAAGCAAAGAAATAG
PROTEIN sequence
Length: 184
MFSTLTQKDGEWYVIRVISGTEENVRQSLLQRREAFNLEDYILEVFVPTHDSVSIRAGGVKVRKKKNIFPGYILVKMVVTNESWYIVRNTPNVTGFLGAGTVPVPVRGEELEQLKGVLEQKSEEYKTSFKIGDYVVISTGPFDGSEGKIIEINEEKGLLKVNVNILGRDTPVELDFANVKAKK*