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ACD3_95_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Transcription-repair coupling factor n=3 Tax=Clostridium thermocellum RepID=A3DIQ2_CLOTH (db=UNIREF evalue=2.0e-115 bit_score=420.0 identity=39.12 coverage=93.9597315436242) similarity UNIREF
DB: UNIREF
39.12 93.96 420 2.00e-115 hpk:Hprae_1747
transcription-repair coupling factor similarity KEGG
DB: KEGG
40.2 605.0 411 4.00e-112 hpk:Hprae_1747
transcription-repair coupling factor rbh KEGG
DB: KEGG
40.2 605.0 411 4.00e-112 hpk:Hprae_1747
seg (db=Seg db_id=seg from=435 to=452) iprscan interpro
DB: Seg
null null null null hpk:Hprae_1747
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=242 evalue=3.5e-50) iprscan interpro
DB: superfamily
null null null 3.50e-50 hpk:Hprae_1747
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=240 to=450 evalue=1.3e-36) iprscan interpro
DB: superfamily
null null null 1.30e-36 hpk:Hprae_1747
no description (db=HMMSmart db_id=SM00487 from=58 to=246 evalue=3.5e-17 interpro_id=IPR014001 interpro_description=DEAD-like helicase, N-terminal) iprscan interpro
DB: HMMSmart
null null null 3.50e-17 hpk:Hprae_1747
DEAD (db=HMMPfam db_id=PF00270 from=65 to=220 evalue=2.3e-12 interpro_id=IPR011545 interpro_description=DNA/RNA helicase, DEAD/DEAH box type, N-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ATP binding (GO:0005524), Molecular Function: ATP-dependent helicase activity (GO:0008026)) iprscan interpro
DB: HMMPfam
null null null 2.30e-12 hpk:Hprae_1747
TRCF domain-like (db=superfamily db_id=SSF143517 from=446 to=594 evalue=2.4e-12) iprscan interpro
DB: superfamily
null null null 2.40e-12 hpk:Hprae_1747
TRCF (db=HMMPfam db_id=PF03461 from=461 to=552 evalue=4.8e-09 interpro_id=IPR005118 interpro_description=Transcription-repair-coupling factor GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
null null null 4.80e-09 hpk:Hprae_1747
Helicase_C (db=HMMPfam db_id=PF00271 from=294 to=367 evalue=4.8e-08 interpro_id=IPR001650 interpro_description=DNA/RNA helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMPfam
null null null 4.80e-08 hpk:Hprae_1747
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=241 to=384 evalue=1.7e-06) iprscan interpro
DB: Gene3D
null null null 1.70e-06 hpk:Hprae_1747
no description (db=HMMSmart db_id=SM00490 from=284 to=369 evalue=3.1e-05 interpro_id=IPR001650 interpro_description=DNA/RNA helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMSmart
null null null 3.10e-05 hpk:Hprae_1747
HELICASE_CTER (db=ProfileScan db_id=PS51194 from=258 to=412 evalue=13.367 interpro_id=IPR001650 interpro_description=DNA/RNA helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: ProfileScan
null null null 1.34e+01 hpk:Hprae_1747
HELICASE_ATP_BIND_1 (db=ProfileScan db_id=PS51192 from=76 to=237 evalue=20.041 interpro_id=IPR014021 interpro_description=Helicase, superfamily 1/2, ATP-binding domain) iprscan interpro
DB: ProfileScan
null null null 2.00e+01 hpk:Hprae_1747
ckn:Calkro_1988 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.1.-] alias=ACD3_549.2942.78G0002,ACD3_549.2942.78_2,ACD3_C00095G00002 id=51107 tax=ACD3 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 1218 0.0 hpk:Hprae_1747
ckn:Calkro_1988 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.1.-] Tax=ACD3 UNIPROT
DB: UniProtKB
98.3 596.0 1057 0.0 ggdbv1_51107