ggKbase home page

pig_ID_2176_F64_scaffold_76674_1

Organism: 277

partial RP 41 / 55 MC: 1 BSCG 40 / 51 MC: 4 ASCG 6 / 38 MC: 1
Location: comp(14..1303)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein id=4571492 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 351.0
  • Bit_score: 173
  • Evalue 2.80e-40
type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 27.9
  • Coverage: 376.0
  • Bit_score: 164
  • Evalue 4.70e-38
Tax=CG_Delta_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 29.7
  • Coverage: 364.0
  • Bit_score: 183
  • Evalue 3.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Delta_05 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGAAAATGAAAAATCTGACTTTCTTTTTGTCCTTACTGATAGGGTGTGCGGCGGTGGGGTGGAGCCAAGAGGCCTTGGCCGCTGCGTCCGCCTCCGCCCCGGCTATCCCCGGCGAGAGCACCTCTTTCCCCCTTCTTAGGCAGGCACATGAAGAGGCCGCTGCCGCCTTGCAAGAGTTGGCCCAAAGCCAAAAGGAGCTGCCTTCTTTAGACGGCAAACTTTCTGTACAAGATTGTGTAGACATCGCTTTGGCCCACAGCCCCAAGGTTATCAGCGCGCGTTTGGCGGTGCAATCGGCGGCGGTGTCTTTAAGCAATGCCAAAAATGTGTTGCTGCCTACGGTTTCCGTCAGCGGCAATGCCGATTTTACCAATTCCAAAGAGCCGGGCTTTGCGCGGCAGAATAACCACGGGACCGACACGGGCGTGAATGCGGGGCTGAGCATTTCCGGCCTGACGGATATCGGGCGGACCATCCAAACCCAAAAGCTGCAGCTCTCCCGCGCCAAGATGGATTTGTGCGATACGGAAAACAGCCTTGTGTCCTCGGTCAAGAGTGCGTATTATGCCTTGCTTTCGGCGCAGCGGGCGGTGGCGATACGCACCCAATCGCGCGATTTGTACCAGGATCAATACGACCGCACCCAAGCGTTTTACGACCAGGGGCTGCGCCCCAAAGTGGATGTAACGACGGCGGAGGTCAACCTCAATAATGAAATTTTAAGTTTAATCCGCGCCAAAAATTTGGTCAAAACCCGCACGGCCACCTTGGCCAATGTCTTGGGCGTCCCGCGCGATACGCCCTTTACCTTACAGGATGAAATCCAAGTGGAAAAACCGGAGCTGACCTTTGAAGAGGCCCTGACCCGCGCGTATGAAAACCGCCCCGATGTGCGCTCCTCCAAGGCAGCCCTGCAGATTAGCGAAATCCAGCTGCGTCAAGCCAAGGCGGCCTATTGGCCGACGTTTACCTTGGGCGCGTCGTTTAGCAAAAGCGGCGATGAGTTCCGCTTAGACAATGACCAAACCCGGCTTTTTGCCGGAGTGGAAATCCCCATTTTTAGCGCACTGAAGGTGCATAACGGGGTCAAACAAGCGCGGATTAATTTGGCCGGTGCGCAAAACAGCGACCGCAGCCTGGCCAACGATGTGTATTTGCAGGTGCAAAGTGCGTTTATCAAAATGAGTGAAGCGGCCGAGAGCATCCCGGTGGCCACCTTTCCGCCTGAGGCCGGGGATATCAAAAGGACAGACTCCGAGGTCAGTCTTAAAGCAGGCGCCACCCCGTAG
PROTEIN sequence
Length: 430
MKMKNLTFFLSLLIGCAAVGWSQEALAAASASAPAIPGESTSFPLLRQAHEEAAAALQELAQSQKELPSLDGKLSVQDCVDIALAHSPKVISARLAVQSAAVSLSNAKNVLLPTVSVSGNADFTNSKEPGFARQNNHGTDTGVNAGLSISGLTDIGRTIQTQKLQLSRAKMDLCDTENSLVSSVKSAYYALLSAQRAVAIRTQSRDLYQDQYDRTQAFYDQGLRPKVDVTTAEVNLNNEILSLIRAKNLVKTRTATLANVLGVPRDTPFTLQDEIQVEKPELTFEEALTRAYENRPDVRSSKAALQISEIQLRQAKAAYWPTFTLGASFSKSGDEFRLDNDQTRLFAGVEIPIFSALKVHNGVKQARINLAGAQNSDRSLANDVYLQVQSAFIKMSEAAESIPVATFPPEAGDIKRTDSEVSLKAGATP*