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qs_4_scaffold_133_26

Organism: QS_4_Halosimplex_carlsbadense_69_31

near complete RP 34 / 55 MC: 2 BSCG 27 / 51 MC: 2 ASCG 35 / 38 MC: 1
Location: comp(25961..26824)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCV2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 287.0
  • Bit_score: 537
  • Evalue 1.10e-149
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 287.0
  • Bit_score: 537
  • Evalue 1.50e-149
tfbD; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 287.0
  • Bit_score: 526
  • Evalue 4.10e-147

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 864
ATGGACGAGGAACGGGGGGAGACGGTCTGTGGGGAGTGTGGGCTGGTCGTCGAGACCGACGAGATAGACCGCGGCCCCGAGTGGCGGGCCTTCGACGCCGCAGAGAAAGACGAGAAGTCCCGCGTCGGCGCGCCGACGACGAACATGATGCACGACAAGGGCCTCTCGACGAACATCGACTGGCGCGACCAGGACGCCTACGGCAACTCGCTGTCGTCGAACCAGCGCCAGAAGATGCAGCGCCTGCGCAAGTGGAACGAGCGGTTCCGCACCCGCGATTCCAAGGAGCGCAACCTCAAGCAGGCACTGGGCGAGATCGACCGGATGGCCTCGGCGCTCGGCCTCCCCGAGAACGTCCGCGAGACCGCCAGCGTCATCTACCGGCGCGCGCTGGACGAGGACCTCCTGCCGGGCCGTTCCATCGAAGGCGTCTCGACGGCGGCGGTTTACGCCGCCGCCCGCCAGGCCGGGGTGCCCCGGAGCCTCGACGAGATCACCGAGGTCTCCCGCGTCGAGAAATCGGAGATCGCACGCACCTACAGGTACGTCATCCGCGAACTGGGCCTGGAGGTCCAGCCGGCCGACCCCGAGAGCTACGTCCCGCGGTTCGCCTCGTCGCTGGAGATGTCCGACGAGGCCGAACACCGCGCGCGGACGCTGCTACAGAACGCCAAAGAGCAGGGCGTCCACTCGGGCAAGTCGCCGGTCGGCCTGGCCGCGGCCGCCGTCTACGCCGCCGCGCTCCTGACCAACGAGAAGACGACCCAGGCCGTCGTCTCGGAGGTCGCCGACATCTCCGAGGTCACCATCCGCAACCGATACCACGAACTCCTCGAGGCCGAGCAGGGTCTCACGGCGGCCTGA
PROTEIN sequence
Length: 288
MDEERGETVCGECGLVVETDEIDRGPEWRAFDAAEKDEKSRVGAPTTNMMHDKGLSTNIDWRDQDAYGNSLSSNQRQKMQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVSTAAVYAAARQAGVPRSLDEITEVSRVEKSEIARTYRYVIRELGLEVQPADPESYVPRFASSLEMSDEAEHRARTLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAVVSEVADISEVTIRNRYHELLEAEQGLTAA*