ggKbase home page

qs_4_scaffold_454_20

Organism: QS_4_Halosimplex_carlsbadense_69_31

near complete RP 34 / 55 MC: 2 BSCG 27 / 51 MC: 2 ASCG 35 / 38 MC: 1
Location: 16954..20526

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW77_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 999.99
  • Bit_score: 1174
  • Evalue 0.0
PAS domain S-box {ECO:0000313|EMBL:ELZ27481.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 999.99
  • Bit_score: 1174
  • Evalue 0.0
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 826.0
  • Bit_score: 851
  • Evalue 3.00e-244

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3573
ATGGTTTCCGAAAGCGTTTTCGGTAGCAACTCCGCCGGCGGAGGGTTGATAGGAGTCGCGGACGACGGTCGAGGTATGGACGCGTCCCCACTGACCACTGCCCTGGAGGAGACCCTCTCGCTGTTCGACGGCGAGGGGACGCCGCGCACGACCAACGAGGTGGCCGAGGAGCTCGACCTCGGGCGCCGAAGCACCTACGAGCGACTGGACCGACTCGTCGAGCACGGCCGTCTGGAGACGAAGAAAGTGGGTGCGAGCGCCCGCGTCTGGTGGCGTCCGCCCACTCCGGGAGAGCCGTCGGCCACCGCCTCGCCCGACGAGGTGGCCGGGCGGGCGGACTCCGAACGGTCCGACCCACTGGTCGAGCAGCTATTCGCGGCGAGCCCGGTCGGGCTCGCGGTGTTCGACCCCGACGGCGTCGAGCGTGCGAACGAGCGGGCGACCGACCTCGTCGGGCTGTCGGCGGGGGACGACCGGGAGGCCGGCGACTGGTCGGTCCATTCCCCCGCGGACGCCTCGGCTGCGAGTGACGCGCACGCCTCGGCCACAACGGACGGCCCGGTCGCGGGCCTGGTCGACGGGGTCTTCGAGACCGGCGAGCCACTCAGGGGACGGGAGCGGCGGGTCCGGACGCCCTCGGGGGAGCGGCGGTGGGTGTCCGTCGACGCGAAGCCGGTCACCGAGGGGGGCGAGGCCGTCCGGGTCGTGGTGGCCGTCTCCGACGTCACGGCGTTCAAGCAGCGAGCCGGGCGGCTCGAACGCCAGCGGGGCGAACTGGCACACCAGCTCAAGGAGATATTCGAGCGCGTCGACGACGCGTTCTTCGCGCTGGACCGGGAGTGGCGGTTCACGTACGTCAACGAGCAGGCCGCGACGCTGCTCGACCGGCCGCGGGACGAACTCGTCGGGGAGTCGGTCTGGGAGCAGTTCCCCGAGGCGGTCGGGACGCGGTTCCAGGCCGAATACGAGCGCGCACGCGAGACGGGGGAGACGGTCTCCCTGGAGGAGTACTACCCGCCGCTGGACCGCTGGTTCGAGGTCACCGCCTACCCCTCCGAGAGCGGGCTGTCGGTGTACTTCCGGAACGTCACCGAACGCAAGGAGCGCGAGCGCGAACTCGAACGGTACGAGACCATCCTGGAGACGGTGAGCGACGGGGTCTGTGTCATGGACGAGGCCGGCCGGTTCACGATGGTCAACGACGCCTACACGGAGATGATGGGCTACGCGAAGGCTGACCTCCTCGGCGAACACAGGGAGACGGTCGTCAGCGAGGCGGTCGCCGACCGCGCGGCGGCGATCCAGGAGGAGCTGGTCGCGGGGGAACGCGAGACAGCGCGCATGGAGGCCGAAATCGAGACGGCCGACGGCGACACGCTCTACGCCGAGGGGACGTTCGCGCTCATCGACCCCGAGGACGGCCCGCCCGAACGCGTCGGCGTGATCCGCGACATCACCGACCGCCGGGAGCGCGAAGAGGAACTCGAACGGTACAGGGCCGTCGTCGAGACGATCGACGACGGCGTCTACGTCGTCGACGACGAGAGCCGGTTCCTGCTGGTCAACGAGGCACACGCCGAACTGACGGGCTACGACCGCGAGGAGTTGCTCGGCTCGCACGCCTCGGTGGTCACGACGCAGGACGACCTCGAACTGGCGGAGCAACGCCGCGACCAACTCATCGCGGACGGGCAGGACGTCGCCAGGGTCGAGACGGAACTCGTGACCAGCGACGGTTCCCGCGTCCCGACCGAGACCAGGTTCGCGCTGTTCCCGCTGGGCGAGGACCGCCACGGCCGCGTCGGCGTGGTTCGGGACATCACCGACCGCCGGGAGCGCGAGCGGGAACTCCACAGGCGGGTCACACAGCAGGAGGCGGTGGCCGACCTCGGCCGGCGCGCCCTCGAAGACCGCGAGGTCGACGACCTGATGTCCGAGGCCGCCGACCTCGTTGCCGACGTCCTCGACACCGACTACTGCAAGGTGCTGGACCTGGACGGCGACGCCGAGGAGTTGCTGCTCCGCCAGGGCGTCGGCTGGGACGAGGGGGTCGTCGGCGAGGCGACGGTCTCGGCCGTCGAGGACGACTCCCAGGCCGCCTACACGCTGGCCTCGACGGACCCGGTCGTGGTTGAGGACCTCACGACGGAGGCGCGGTTCAGCGGCCCGGAGTTGCTGACGAGCCACGACGTCCGGAGCGGGATCAGCGTCGTCATCGGTCCGGACGACGACCCCTGGGGGATCCTCGGGACACACGACACGGACCGGCGGACGTTCTCGGACCACGACGTGACTTTCGTCCAGTCGGTCGCGAACACCCTCGCGACCGCGATCACCCGTCACAGGGACGAACTGGCGCTCGTCCGCCAGCGCGAGCAACTCGCCGCGCTAAACGACCTCAACAGGACCATCCGCGAGACGACCGACGCCATCATCGACCAGTCGACGCGCACGGAGATCGAGCGAACCGTCTGTGAGTACCTGACGAACGCGGAGTCGTACACGTTCGCCTGGATCGGTGAGGTCGACGTCGCCTCACAGACGGTCGAACCCCGGGCCGCGGTCGGCGCCGACGGCTACCTCGACGAGATCACTGTCACGGTCGACCCGGCGGACGAACGCAGCGAAGGACCGACGGGCAGAGCCCTCCGGACCGGCGAGACACAGACCGTCCAGAACATCGACGCCGCCGACACCCACGACCCCTGGCGCGACCAGGTCCGGGAGTACGGCTTCCGGTCGGCGGCGGCGGTCCCGGTCGCCTACGACGGCACCACCTACGGCGTCCTGAACGTCTACGCCGACCGCCCCAACGCCTTCGAGCGCCGCGAGCGGGCGGTCATCGACCAGCTCGGCGCGGTCGTCGGCCACGCCATCGCGGCCACGGAGCGCAAACAGGCCCTGATGAGCGACGAGGTCGTCGAACTCGAGTTCCGGATCGAGGACATCCTCGGGGCGCTCGACGTCGACGGGGACGCGACGGGCACCGTCGCGATCGAACACGTCGTGGCGGTCGAGGACGACGAGTTCCGCGTGTTCGGACACGCCGACGAGACCGGCGTCGGAACCGTCGACGCGCTCGTCGAGGCGCTCCCCCACTGGACGGACGTGACAGTCCGGGGTGAGGGCGAGCAACCGAACTTCGAGGCGCACCTCTCGGAGCCGCCGGTTCTCTCCTCGCTGGCCTCGGTCGGCGGGTCCGTCGAACGGGCCGTCATCGAGGACGGCGACTACTGGATGCGGATCCACGTCTCCCCGGGCACCGACGTCCGCCAGTTGATCGACACCGTCAAAGAGTCCTATCCCGCCGCGACCCTGTTGAAACGCCGGCAACGGTCGAACCACGAGGACCGCGGCTACCGGCCCGACCTGCTGACGTCGGAACTCACCGACCGCCAGCGGACCGCCCTCGAGACCGCCTACTTCGCGGGCTTTTTCGAGTGGCCCCGGGAGGCCGACGGCACGGACGTCGCCGACTCGCTGGGCGTCTCGCCGCCGACCGTCCACCAGCACCTCCGGAAGGCCGAGCGCAAGGTGTTCGACGCGCTGTTTTCGGCCGCACCGGGGGCCTGA
PROTEIN sequence
Length: 1191
MVSESVFGSNSAGGGLIGVADDGRGMDASPLTTALEETLSLFDGEGTPRTTNEVAEELDLGRRSTYERLDRLVEHGRLETKKVGASARVWWRPPTPGEPSATASPDEVAGRADSERSDPLVEQLFAASPVGLAVFDPDGVERANERATDLVGLSAGDDREAGDWSVHSPADASAASDAHASATTDGPVAGLVDGVFETGEPLRGRERRVRTPSGERRWVSVDAKPVTEGGEAVRVVVAVSDVTAFKQRAGRLERQRGELAHQLKEIFERVDDAFFALDREWRFTYVNEQAATLLDRPRDELVGESVWEQFPEAVGTRFQAEYERARETGETVSLEEYYPPLDRWFEVTAYPSESGLSVYFRNVTERKERERELERYETILETVSDGVCVMDEAGRFTMVNDAYTEMMGYAKADLLGEHRETVVSEAVADRAAAIQEELVAGERETARMEAEIETADGDTLYAEGTFALIDPEDGPPERVGVIRDITDRREREEELERYRAVVETIDDGVYVVDDESRFLLVNEAHAELTGYDREELLGSHASVVTTQDDLELAEQRRDQLIADGQDVARVETELVTSDGSRVPTETRFALFPLGEDRHGRVGVVRDITDRRERERELHRRVTQQEAVADLGRRALEDREVDDLMSEAADLVADVLDTDYCKVLDLDGDAEELLLRQGVGWDEGVVGEATVSAVEDDSQAAYTLASTDPVVVEDLTTEARFSGPELLTSHDVRSGISVVIGPDDDPWGILGTHDTDRRTFSDHDVTFVQSVANTLATAITRHRDELALVRQREQLAALNDLNRTIRETTDAIIDQSTRTEIERTVCEYLTNAESYTFAWIGEVDVASQTVEPRAAVGADGYLDEITVTVDPADERSEGPTGRALRTGETQTVQNIDAADTHDPWRDQVREYGFRSAAAVPVAYDGTTYGVLNVYADRPNAFERRERAVIDQLGAVVGHAIAATERKQALMSDEVVELEFRIEDILGALDVDGDATGTVAIEHVVAVEDDEFRVFGHADETGVGTVDALVEALPHWTDVTVRGEGEQPNFEAHLSEPPVLSSLASVGGSVERAVIEDGDYWMRIHVSPGTDVRQLIDTVKESYPAATLLKRRQRSNHEDRGYRPDLLTSELTDRQRTALETAYFAGFFEWPREADGTDVADSLGVSPPTVHQHLRKAERKVFDALFSAAPGA*