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qs_4_scaffold_2306_4

Organism: QS_4_Halosimplex_carlsbadense_68_82

partial RP 36 / 55 MC: 3 BSCG 27 / 51 MC: 2 ASCG 30 / 38 MC: 1
Location: comp(3945..5489)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C large subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ93_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 492.0
  • Bit_score: 792
  • Evalue 2.60e-226
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 492.0
  • Bit_score: 792
  • Evalue 3.60e-226
rfcB; replication factor C large subunit similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 515.0
  • Bit_score: 769
  • Evalue 8.60e-220

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1545
ATGGTAGACTGGACGGAGAAGCACCGGCCGTCGTCGCTGGCCGAACTCCGGGGCAACGACAAGGCGCGCGACGCCCTCCGGGAGTGGGCCGATACCTGGGCAGACCACCGCGAGGCGGTCGTCCTCCACGGGTCGCCCGGCGTCGGCAAGACCTCCGCCGCCCACGCGCTTGCCGGGGACGAGGGGTGGCCGACCATCGAACTCAACGCCTCCGACTCCCGCACGAAAGACGTCATCGAACGCGTCGCCGGCGAGGCCGCCAAGTCCGGGACGCTCACCGCGGGCGGGAGCGGCCGACGCCTCGTCGTCCTGGACGAGGCCGACAACCTCCACGGCAACGTCGACCGGGGCGGCACCCGCGCGATCACCTCGCTGGTCAAGGAGGCCGACCAGCCCGTGATCCTCATCGCAAACGAGTTCTACGAGATGTCGAACGGTCTCCGGAGCGCCTGCCAGGACATCGAGTTCCGGGACGTCGGCAAGCGCTCCATCGTGCCCGTCCTCCGGGACCTGTGTCGCCAGGAGGACATCGAGTTCGAGGACGCCGCCTTGGACCGGATCGCCGAGATGAACAGCGGCGACCTCCGGGGGGCGGTCAAGGACCTCCAGGCGCTGGCCGAGGGCCGCGAGTCCATCGCCGCCGAGGACGTCGTCACGGGCGAGCGCGACCGGACGAAGGGCGTGTTCGATTACCTCGACACCGTGATCAAGGAGGCCGGCGCGCAGGAGGCCCTCGAAGCGTCCTACGACGTCGACGAGACGCCGGACGACCTCATCAACTGGATCGAGGACAACGTGCCCAAGGACTACGAGGGCGAGGAACTCGCGGTCGCCTACGAGTTCCTGGCCAACGCCGACCGCTGGCTCGGGCGGGTCCGCGAGACGCAGAACTACACGTTCTGGCGCTACGCGGGCGACAACATGACTGCGGGCGTCGCGGCGGCCCGCCGGAAACCCAAGGGCGGGTGGACCCGCTACGGCCCGCCGAGTTACTGGTCGAAACTCGGGCGCACCAGCGGCACGCGGGACACCCGCGATCACATCGCCCGACAGGTCGCCGAGGAAAACGGGGTCAGCATGTCCACGGCCCGCCGGGAGGTCATGCCCCACCTCGCGGTCATGACCCACCACTGCAAGAACCGCGATCTGACGGTGGCGATGGCCGCTCGCTACGACCTGGAGGAGAAACACGTTTCCTTCATCACCGGCAGCGGCGAGGACACCAACAAGGTCCGGTCCATCGTCGAGGACGCCAAGGCGTTGCAGGAGGAACTCGCCGTCGAGCACGGTGGGGGCGCGTTCGAGGGCGGCAGTACCGACGGTGAGACGCCCGAGGAGGCGGGAGCAGACGACGAGGAAACTGTGGACGAGGACGCGGAGGACGGCGATGCCGACGCCGACACCGACGAATCGGTCTCACAGGCGTCGCTCGACGGGGGTGCGAGCAATGGGGAAGGAGACGCCGAAGCGGACGGCGAGGCGGCCGAGGCGGACGACGACCCGGCGGAGGACGAACAGCAGTCGGGGCTGTCCGATTTCACGTGA
PROTEIN sequence
Length: 515
MVDWTEKHRPSSLAELRGNDKARDALREWADTWADHREAVVLHGSPGVGKTSAAHALAGDEGWPTIELNASDSRTKDVIERVAGEAAKSGTLTAGGSGRRLVVLDEADNLHGNVDRGGTRAITSLVKEADQPVILIANEFYEMSNGLRSACQDIEFRDVGKRSIVPVLRDLCRQEDIEFEDAALDRIAEMNSGDLRGAVKDLQALAEGRESIAAEDVVTGERDRTKGVFDYLDTVIKEAGAQEALEASYDVDETPDDLINWIEDNVPKDYEGEELAVAYEFLANADRWLGRVRETQNYTFWRYAGDNMTAGVAAARRKPKGGWTRYGPPSYWSKLGRTSGTRDTRDHIARQVAEENGVSMSTARREVMPHLAVMTHHCKNRDLTVAMAARYDLEEKHVSFITGSGEDTNKVRSIVEDAKALQEELAVEHGGGAFEGGSTDGETPEEAGADDEETVDEDAEDGDADADTDESVSQASLDGGASNGEGDAEADGEAAEADDDPAEDEQQSGLSDFT*