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qs_4_scaffold_604_4

Organism: QS_4_Halosimplex_carlsbadense_68_82

partial RP 36 / 55 MC: 3 BSCG 27 / 51 MC: 2 ASCG 30 / 38 MC: 1
Location: 4236..5681

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 485.0
  • Bit_score: 695
  • Evalue 4.30e-197
truD; tRNA pseudouridine synthase D (EC:4.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 481.0
  • Bit_score: 645
  • Evalue 1.00e-182
Probable tRNA pseudouridine synthase D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 485.0
  • Bit_score: 695
  • Evalue 3.10e-197

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1446
ATGCGCGAGGCCCACCCAATCGAGCGCGCCGTCGGCATGGACTACTACGTCAGCGACGCCGACGGCGTCGGCGGCCGCCTCCGCGCGGAACCCGAGGACTTCCGCGTCGAGGAGGTCGAGGCCTTCGACCCGGAACCGCTCGACGCCGACCCCGGTGCGTACCCCCACGTCCTCTGTCGGGTCACCCTCCGGTCGTGGGACACCAACGACTTCGCCGGCGCGCTCTCGAACGCGCTGGGGGTCTCCCGCGAGCGGGTCTCCTGGGCGGGCACCAAGGACAAACACGCCGTCACGACACAGCTGTTCTCGGTCGCCAGAATCGACCCGGGGGACCTCCGCGCGGTCGAACTCGGCGGCGCGGACGTCGAACTCCTGGGCCGGGCCGGCCGGCCGATCCTCTTCGGTGACCTGGCCGGCAACGCTTTCGAGATCCGCGTCTGCGACGCCGGCGCACCCGAAGCGGTTCCCGCCGTCACCGCCGACCTCGCCGCCTTCGCGACCGGCGGCGAGAGGTCCGGATCCGACGTCGAAACCGAACTCGTCGACGGCGACACAGTCGAAACGACGGTGGGCGTCCCCAACTACTTCGGCCAGCAGCGCTTCGGCAGCAGGCGCCCGGTCACCCACGAGGTCGGCCTCGAAATCCTCCGCGGGGACTGGAAGAGTGCGGTTCTGGCCTACGTCGGCAACCCCCACGAGCAGGAACCCGAGGAGACCCGGGAAGCCCGCGCCTACGTCGACGAGACCGAGGACTGGGCGGGCGCGCTGGAGCGGTTGCCCCGGCACCTGGGCTACGAGCGGTCGATCTGTCACCGCCTCGTCGAGAACAGCGGGGCGCGAAGCGCCTCGGACCAGTCGAGCGGGCGGAGCCCGCGAGACGACGGCGCCGACGCTCCCGCGGACTTCCGCGCCGCGCTCGAAGCGGTCCCCGCGAACCTCCAGCGCCTGTTCGTCAACGCCGCCCAGTCCTACGCGTTCAACCGGACCCTCTCCGAGCGTCTCGCCCGCGGCTTGCCCTTTCGCGAACCGGTCGCCGGCGACGTGGTCTGCTTTTCCGATCCGGACGCCCCCGCCGGTCTCCCGCTGCCGGACGCCGACCGGACCCAGCGGGTCACCGAAGACCGCCTCGGAACGGTCCGGCGCCACTGTGACCGGGGCCGGGCGTTCGTCACCGCGCCGCTCGTCGGCACCGAAACCGACCTCGCGGAGGGCGAACCCGGCGAGATCGAGCGCGCGGTCCTGGCCGACCTCGACCTCGCGCCCGAGGACTTCGACCTGCCCGGCGAGTTCGGCTCGGCGGGGACGCGGCGGGCGATACTCCTGCGGACCGACCTGGCAGTCGAGCGTGAGGACGACCGCCTCGCCTTCGCGTTCGCGCTACCGAAGGGGTCCTACGCGACGGTTGTCCTCCGGGAGCCCCTCAAGGCCGACCCCGGGGACCTGTAG
PROTEIN sequence
Length: 482
MREAHPIERAVGMDYYVSDADGVGGRLRAEPEDFRVEEVEAFDPEPLDADPGAYPHVLCRVTLRSWDTNDFAGALSNALGVSRERVSWAGTKDKHAVTTQLFSVARIDPGDLRAVELGGADVELLGRAGRPILFGDLAGNAFEIRVCDAGAPEAVPAVTADLAAFATGGERSGSDVETELVDGDTVETTVGVPNYFGQQRFGSRRPVTHEVGLEILRGDWKSAVLAYVGNPHEQEPEETREARAYVDETEDWAGALERLPRHLGYERSICHRLVENSGARSASDQSSGRSPRDDGADAPADFRAALEAVPANLQRLFVNAAQSYAFNRTLSERLARGLPFREPVAGDVVCFSDPDAPAGLPLPDADRTQRVTEDRLGTVRRHCDRGRAFVTAPLVGTETDLAEGEPGEIERAVLADLDLAPEDFDLPGEFGSAGTRRAILLRTDLAVEREDDRLAFAFALPKGSYATVVLREPLKADPGDL*