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qs_4_scaffold_5694_6

Organism: QS_4_Halobacteriales_70_21

partial RP 24 / 55 MC: 1 BSCG 21 / 51 MC: 4 ASCG 23 / 38 MC: 3
Location: comp(4096..4725)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHZ5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 207.0
  • Bit_score: 358
  • Evalue 5.00e-96
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 207.0
  • Bit_score: 358
  • Evalue 7.00e-96
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 208.0
  • Bit_score: 351
  • Evalue 1.70e-94

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 630
AAGATGCAGCGGCTCCGCACCTGGAACGAGCGGTTCCGCACCCGCGACTCCAAGGAGCGAAACCTCAAGCAGGCGCTGGGCGAAATCGACCGGATGGCGTCGGCACTCGGCCTCCCCGAGAACGTCCGGGAGACGGCCTCGGTCATCTACCGCCGGGCGCTCGACGAGGACCTCCTGCCCGGGCGGTCCATCGAGGGCGTCGCCACCGCGTCGCTGTACGCCGCCGCCCGGCAGGCGAACACGCCCCGGAGCCTCGACGAGGTCTCGACGGTCTCCCGGGTCGGGAAGGACGAGATCGCGCGCACCTACCGGTACGTGGTCCGGGAGCTGACCCTCGAGATCGAGCCGGCCGACCCCAAGAGCTACCTGCCTCGGTTCGTCAGCGAACTCCGGCTGCCCGAGGAGGTCGAGCGACGCGCCCGCGAGCTGCTCGACACGGCCGCCGAGGCCGGCGTCCACTCGGGGAAGTCCCCGGTCGGGCTGGCCGCGGCCGCGATCTACGCCGCGTCGCTGCTCTGCAACGAGAAGGTCACCCAGAACGAGGTCAGCGAGGTGGCGAACATCTCGGAGGTCACCATCCGGAACCGGTACCACGAGCTGCTCAAGGCCGAGAAGGACCTCCAGGTCTGA
PROTEIN sequence
Length: 210
KMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVATASLYAAARQANTPRSLDEVSTVSRVGKDEIARTYRYVVRELTLEIEPADPKSYLPRFVSELRLPEEVERRARELLDTAAEAGVHSGKSPVGLAAAAIYAASLLCNEKVTQNEVSEVANISEVTIRNRYHELLKAEKDLQV*