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qs_6_scaffold_263_20

Organism: QS_6_Halosimplex_carlsbadense_69_22

near complete RP 28 / 55 MC: 3 BSCG 22 / 51 MC: 2 ASCG 32 / 38 MC: 1
Location: 15463..18354

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 979.0
  • Bit_score: 1411
  • Evalue 0.0
tRNA-splicing ligase RtcB n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EQU6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 979.0
  • Bit_score: 1411
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 978.0
  • Bit_score: 1367
  • Evalue 0.0

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Taxonomy

Halorubrum coriense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2892
ATGACCACCTACGAGGCCGACGGCATCACGCTCGAACAGGTCCGCGAGTTCGTCTGGGAGATCCCACGGGAGGGCGGGATGAACGCGCCGGCCCGGGTCCTCGCGAGCGAGGCGCTCCTCGACGAGATCAGCGACGACAAGACCCTCCAGCAACTCAGGAACGCGACACACCTCCCCGGCGTCCGGAAGTACGCCGTCTGCATGCCCGACGGCCACCAGGGCTACGGCTTCCCCGTCGGCGGCGTCGCCGCCATCGACGCCGAACACGGCTGTATCTCGCCCGGAGCGATCGGGTACGACATCAACTGCCTTACGGCGGATACGGACGTGTTGCTCTCGCACGGCCGGTCGCTGCCGATAGCGGAACTCCGGGACCGATTCGAGTCCGAGGAAGCGGTCGTTCCGGCCGGCGACGACCTGGTCGAGTCGGGGATCCGGCTGTTCACCGAGTCGGGGACCAAGCCGGTCTACGAGGTCGAAACGGAGACGGGCCGGACGCTCCAGGCGACCGCCGACCATCCGGTTCGGACCGACGACGGCATGGTCGATGTGCGCGACCTCGAAGCCGGCGACACCGTCGCAGTCCACCCGTTCGAGGGGATCGAACACGAACAACCCGAGGAGTTCACGATCCTGTCCCCGGAGGACTTCAAGGGTGAAAGTCGACAGCTAGTCCGGGCCTTGGAAGAGCGCGACCTGCTCCCGCTCACGTCGACTGACCGGAAGCTTCCCTACCTGCTCAAGATGGTCGGCTACCTCCTCGGCGATGGCGCGTTCGCCGGGAGCGGACAGACGTGGTTCTACGGCGACCCCGAAGAACTCGAGGCGATCCGCGACGATGTCCGTGCGCTCGGATTCAAACCGTCGAGGATCTACGAGCGCGAACGAAACCACGAGACCGACGGCAACACCTTCGAGACGACCGAATACAGTTTCACAGTGACCGCCCGGTCACTCCGGAAGGCCTTCGTCGAACTCGGCGTCCCCGAGCAACCGAAGGTCGAATCCGGGTTCACGACACCCGAGTATCTGGGCAGACTGGCTGATTGGCAGAAAGCGCTGTTCTACGCCGCGTATTTCGGCACAGAGATGAACGCATTGGCTGCCCAACATGATAAGAACCTCTACTGTCCGAAAGTCTCCCAAACCCGGACCGAGTCGACTGCCGACGCTGGGCGACAGTTCCTCGAAGACCTGCGCGAGTTTCTCGGAGACGTCGGCATCGAGGCGAACGCGATCGAGGAGTTCGAGACGGACTCGAACCGCGACCACCGGACGGTCCGGCTCCGGGTCGGGATCAAAAACGACTCGGTGAACCTGGTCCGGTTTTTCTCTCGGGTCGGCTACCGCTACAATCCCGAAAAACAGCGGAAGGCACTGAAATCGGTACAGTACCTGCGGGCCAAAGAGCGCGAGATATCGCGACGGGAACGGATAGCGAGCGAGGCGCAGGCGCTCGCCGACGGGGGGACGGCCGTCTCCGAACTCCGGGACGGGTTCGACATCAACGACCGATTCGTCGAACGGAGCGTCTGGAGCGGTCGGTCCGGGCGGCCACAGCCGGGCAGTGACTTCCCGGACTACGACGAATTCTGTTCCGAAACCGAGGTCAAGGAGGACGGGACTATCCAGTCGGAGGTCGTCTCGATAGAAGCGGTCGGCGAGAAACCGGTGTACGACATCGGCGTAACCCACGACGCACACGCGTTCCTCGCGGACGGGTTCGTCGTCTCGAACTGCGGCGTCAGGATGGTGAAGACGAACCTCACCTACGACGACGTGCGCGGCCGGGAGGCGGAACTCGTGGACGCGCTGTTCGCGAACGTCCCGACGGGGCTGGGCGGGGGCGGCGTCTTCGAGGGGACGAAAGGGGACATCGAGGACATCCTCGAAGGCGGCGTCGAGTGGGCGCTCGAAGAGGGGTACGCGGTCCCGGGGGACCTGGACCACTGCGAGGACGAGGGTCGTCGTCCCGACGCCGATCCGTCGGCGGTCTCACAGAAGGCCAAGGACCGCGGCAAGAACCAGGTCGGAAGCCTCGGGAGCGGCAACCACTTCCTGGAGGTCCAGCGGGTGACAGACGTCTACCGGGACGACGTGGCGAGCGAGTTCGGCCTGGAACGGGACCAGGTCGTCGTCCTGATCCACTGTGGCTCGCGGGGGCTGGGCCACCAGGTCTGTACCGACTACCTCCGGGAGATAGAGCAGGCCCACGCCGGCCTCCTCGACCGCCTGCCCGACAAGGAACTCGCGGCGGCGCCCGCGGGGTCGCAACTGGCCGAGGCGTACTACGGCGCGATGTGTGCGGCGATCAACTTCGCGTGGGTCAATCGACAGCTCATCACCCACCAGACTCGGCGCGTCTTCGGGAAGGTCTTCGACGAGGACCCGGAGGCCCTGGGGATGGACCTGCTGTACGACGTGGCTCACAACATCGGCAAGAAGGAGGTCCACGACCTGGGCGACGAGCGGGGGGAGGTGTACCTCCACCGCAAGGGTGCGACGCGGGCGTTCCCGGCGGGGCGCGAGGAAGTGCCGCCGGCCTACCGCGGCGTCGGCCAGCCGGTCCTCATCCCCGGGAGCATGGGGGCGGGCAGTTACGTCCTCCGGGGCGGCGAGAACTCCCTGGCGGAGACGTTCGGCTCGACCGCCCACGGCGCGGGGCGACTGATGAGCCGCACCCAGGCCAAACAGGAGTTCTGGGGCGAGGACGTGATGGACGACCTGCGCGACCACAACCAGGTGTACGTGAAAGCCCAGAGCGGCGCGACGGTCGCCGAGGAAGCCCCCGGCGTCTACAAGGACGTCGACGAGGTGGTGCGGGTCTCGGACGCGCTCGGTATCGGCGACCGCGTCGCACGGACCTACCCGGTCTGTAACATCAAGGGGTAG
PROTEIN sequence
Length: 964
MTTYEADGITLEQVREFVWEIPREGGMNAPARVLASEALLDEISDDKTLQQLRNATHLPGVRKYAVCMPDGHQGYGFPVGGVAAIDAEHGCISPGAIGYDINCLTADTDVLLSHGRSLPIAELRDRFESEEAVVPAGDDLVESGIRLFTESGTKPVYEVETETGRTLQATADHPVRTDDGMVDVRDLEAGDTVAVHPFEGIEHEQPEEFTILSPEDFKGESRQLVRALEERDLLPLTSTDRKLPYLLKMVGYLLGDGAFAGSGQTWFYGDPEELEAIRDDVRALGFKPSRIYERERNHETDGNTFETTEYSFTVTARSLRKAFVELGVPEQPKVESGFTTPEYLGRLADWQKALFYAAYFGTEMNALAAQHDKNLYCPKVSQTRTESTADAGRQFLEDLREFLGDVGIEANAIEEFETDSNRDHRTVRLRVGIKNDSVNLVRFFSRVGYRYNPEKQRKALKSVQYLRAKEREISRRERIASEAQALADGGTAVSELRDGFDINDRFVERSVWSGRSGRPQPGSDFPDYDEFCSETEVKEDGTIQSEVVSIEAVGEKPVYDIGVTHDAHAFLADGFVVSNCGVRMVKTNLTYDDVRGREAELVDALFANVPTGLGGGGVFEGTKGDIEDILEGGVEWALEEGYAVPGDLDHCEDEGRRPDADPSAVSQKAKDRGKNQVGSLGSGNHFLEVQRVTDVYRDDVASEFGLERDQVVVLIHCGSRGLGHQVCTDYLREIEQAHAGLLDRLPDKELAAAPAGSQLAEAYYGAMCAAINFAWVNRQLITHQTRRVFGKVFDEDPEALGMDLLYDVAHNIGKKEVHDLGDERGEVYLHRKGATRAFPAGREEVPPAYRGVGQPVLIPGSMGAGSYVLRGGENSLAETFGSTAHGAGRLMSRTQAKQEFWGEDVMDDLRDHNQVYVKAQSGATVAEEAPGVYKDVDEVVRVSDALGIGDRVARTYPVCNIKG*