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qs_9_scaffold_7894_4

Organism: QS_9_Salinibacter_ruber_64_17

partial RP 30 / 55 MC: 1 BSCG 29 / 51 ASCG 4 / 38
Location: comp(1889..2428)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=761659 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 228
  • Evalue 9.40e-57
2'-5' RNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9I0_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 228
  • Evalue 6.70e-57
ligT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 228
  • Evalue 1.90e-57

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGCGGCTGTTCACAGCGATCGAGATTCCCGAGCCTCTGCGCGAGTCTCTTTCGGCGATCCAGGACCCAGACGCCCTCCAGGCCCGGTGGACCGATCCCGAACAGTTTCACGTCACCCTCCGCTTCATTGGTAACGTGGAGGAGGCCCAGGTCGCCCGCTACGAAAAAGCCCTCGCGGACGTGAACGCAGGCCCCGTACAGTGCGACCCGTACGGCCTCGATGTCCTTCCGTCCCGCCGTTCTCCTCGGGTCCTCATGCTCGGGCTGGAGCGCACCGACTCCTTGATGGCCCTCTACGACGCCGTGAGCGATGGACTCGAAACGGAAGGCTTGGAGGCCGAAGACCGTGCCTATCGGCCCCACGTCACCATCGGCCGACTGGACGAGGCCGACCCAGACGCCGTCCACGACTACCTCCGTCTCCACGAGGACCGTTCGTTTCCAAACTTCAAGGTCGATCGCGTTGTGCTCTACGAGAGCACCCTGACGCCGGAGGGGGCGATCTACGAACCGCAAGCCATGTATCCGCTAGATGCCTGA
PROTEIN sequence
Length: 180
MRLFTAIEIPEPLRESLSAIQDPDALQARWTDPEQFHVTLRFIGNVEEAQVARYEKALADVNAGPVQCDPYGLDVLPSRRSPRVLMLGLERTDSLMALYDAVSDGLETEGLEAEDRAYRPHVTIGRLDEADPDAVHDYLRLHEDRSFPNFKVDRVVLYESTLTPEGAIYEPQAMYPLDA*