ggKbase home page

qs_9_scaffold_6320_4

Organism: QS_9_Halomicrobium_mukohataei_63_11

partial RP 5 / 55 BSCG 6 / 51 ASCG 14 / 38 MC: 1
Location: comp(2433..2831)

Top 3 Functional Annotations

Value Algorithm Source
tfb4; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB id=24646890 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64 similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 101.0
  • Bit_score: 122
  • Evalue 2.90e-25
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB {ECO:0000313|EMBL:ERH11054.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.; similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 101.0
  • Bit_score: 122
  • Evalue 4.10e-25
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 78.0
  • Bit_score: 120
  • Evalue 3.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

halophilic archaeon J07HX64 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 399
ATGACCGATACCACCATCAGGCGATATACGGACGAACGCGAGTACACGGAGGAGACCGAGGACGACGAAGAGGAGGTCGTCTGTCCAGAGTGTGGCGGCGACCTCGTCTCGGATGGCGAGCGTGGCGAGACGGTCTGTGAGGAGTGTGGACTCGTCGTCGAAGAGGACGAAATCGACCCCGGCCCCGAGTGGCGAGCGTTCGACGCCAAAGAGCAGGGCGTCCACTCCGGCAAGTCCCCCGTCGGACTCGCGGCCGCGTCGGTGTATGCCGCCTCGCTCCTGACCAATCAGAAAGTCACCCAGAGCGAGGTCAGCGAAGTCGCAAACATCTCGGAAGTGACGATCCGAAACCGCTATCACGAACTGCTGGAAGCCGAAGAAGAGATCCAGCAGCTATAG
PROTEIN sequence
Length: 133
MTDTTIRRYTDEREYTEETEDDEEEVVCPECGGDLVSDGERGETVCEECGLVVEEDEIDPGPEWRAFDAKEQGVHSGKSPVGLAAASVYAASLLTNQKVTQSEVSEVANISEVTIRNRYHELLEAEEEIQQL*