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sw_10_scaffold_3256_4

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: comp(1937..2287)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 115.0
  • Bit_score: 140
  • Evalue 2.60e-31
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ83100.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ83100.1};; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 115.0
  • Bit_score: 140
  • Evalue 1.30e-30
DNA-directed RNA polymerase subunit F n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W822_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 115.0
  • Bit_score: 140
  • Evalue 9.20e-31

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Taxonomy

Haloferax elongans → Haloferax → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 351
ATGATAGTTAAGGAAAAACTCGACGAGGAGTATGTATCGGTAGCGGAGGTTAAAGAGGTTTTGAACGATCTCGCCGACGAAAGAGGGGAGCAGGAGCGCGAGATGGTTTTCGAGCTACGGAAATCGATCGACAACATCAACGAAATCGCTAAACTCGACTTAGAGGATGCCGACGAACTCTACAGCCAACTCGTCGAACTGGAGTCGGTGGACGAGTTCACGGGATACAAGATAGTGGATCTCTTGCCCGAAAACCGGGACGAGTTACGGGCGATATACGCGAAGGAACGGTACTCTCTCGACGGCGACGAACTCGACGAGATTCTTAACATAGTCGCCAAATATAGGTAA
PROTEIN sequence
Length: 117
MIVKEKLDEEYVSVAEVKEVLNDLADERGEQEREMVFELRKSIDNINEIAKLDLEDADELYSQLVELESVDEFTGYKIVDLLPENRDELRAIYAKERYSLDGDELDEILNIVAKYR*