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sw_10_scaffold_4580_4

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: comp(3220..4059)

Top 3 Functional Annotations

Value Algorithm Source
carbamoyl phosphate synthase small subunit (EC:6.3.5.5) similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 265.0
  • Bit_score: 286
  • Evalue 9.10e-75
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 265.0
  • Bit_score: 286
  • Evalue 4.50e-74
Carbamoyl-phosphate synthase small chain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XK5_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 265.0
  • Bit_score: 286
  • Evalue 3.20e-74

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Taxonomy

Methanococcoides burtonii → Methanococcoides → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 840
CGCGAGTTTTCGACGACACCCGACGATGTACTCGAGTGGTTCAGGGAGGAGAAGGTTCCGGCGATGAGTGGCGTCGACACGAGGGCGTTAACCACCAAGACTAGGGAGTACGGAACAATGCGTGCGGGACTCGTGGTTGGCGACGATGTCGACGAGGAGCGCGCCCTAGAGATAGCGAAGGACTGCCCCGACATCAAGGAACTAGATCTCGGTAGTGAGGTGACGTGTAGTGAAGCCACGAGGCTCGAAGGATTCGACAGTCAGGATTACGACGAGAACCCCACGGTTGCGTTGATAGACTGCGGGTCGAAACGCAACATAATAACGAGTCTGAGGAACAGAAACATCGATGTCGTCCGTATGCCATACGACTCGACACCCGGCGAGATAAGGGAGTGCGATCCCGACTCTCTCTTCGTGTCGAACGGTCCCGGCGATCCAGCTAACTACAACGAGGCGGTCGAAGCGATCCGTGAGTTCACGGGAGAGATACCGATTTCGGGTGTATGTCTCGGACACCAACTGATCTCGCGTGCATTCGACGCCGAAACCTACAAACTTAAGTTCGGGCATAGAGGCGCGAACCAACCCGTCAAAGATCTGGACGACGAAATCGTTCACATCACGGCACAGAACCACGGATTCGCGGTCGACGAGGACACCCTCACAGAACTCGAAATAACCGAGGTTAACGCCAATGACGGCACGAGCGAGGCACTCGAAAACCCCGACCTCAAGATCATGGCGAGACAGTACCACCCCGAAGCGCATTCGGGTCCACGCGACACCGAACAGGAGTTCTTCGACCAGGTATACCACAACACAGTCGAGGGACTATAA
PROTEIN sequence
Length: 280
REFSTTPDDVLEWFREEKVPAMSGVDTRALTTKTREYGTMRAGLVVGDDVDEERALEIAKDCPDIKELDLGSEVTCSEATRLEGFDSQDYDENPTVALIDCGSKRNIITSLRNRNIDVVRMPYDSTPGEIRECDPDSLFVSNGPGDPANYNEAVEAIREFTGEIPISGVCLGHQLISRAFDAETYKLKFGHRGANQPVKDLDDEIVHITAQNHGFAVDEDTLTELEITEVNANDGTSEALENPDLKIMARQYHPEAHSGPRDTEQEFFDQVYHNTVEGL*