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sw_10_scaffold_5156_6

Organism: SW_10_Halobacteria_52_9

partial RP 30 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 25 / 38 MC: 1
Location: comp(4536..5354)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1227456 species="Archaea; Eurya similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 273.0
  • Bit_score: 389
  • Evalue 3.70e-105
DNA polymerase II large subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAP7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 273.0
  • Bit_score: 389
  • Evalue 2.70e-105
DNA polymerase type II, large subunit similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 273.0
  • Bit_score: 383
  • Evalue 7.00e-104

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 819
GGGTTCACGTCCGCTTCGGTGGGTTACGCCCATCCCTTTTTTCACGCCGCCAAACGACGCAACTGTGACGGTGACGAGGACTGCGTAATGTTACTGATGGATGGGTTACTCAACTTCTCGAAGTCGTATCTCCCCGACAGGAGAGGTGGACGGATGGATGCACCCCTCGTGTTGACGACGCGTGTTGATCCCGAAGAAATCGACGACGAAGCCCACAACGTCGACAAGATGTCAGTATACCCCAGAGATTTCTATCTCGAAACACTAGAGATCGCGGATCCAAAAGACATCAGGGAGAGGGTTGACCTGGAGGTCGCGGAAGACACGTTGGGTAGCGTGGATGCCGTATCGGGTTTCCATCACTCGGTAGAGACGGACGGGATCGCGGTGGGTCCCGACAACTCGGCGTACAAGACATTGGGGTCGATGCTCGAAAAAACCGAGGCTCAGCTAGAGGTCGGTAGAAAAACGAGGGCGGTCGACGAAGCCGACGTAGCGGAGAGGGTAGTTCAGTCCCACTTTCTCCCTGACTTGATCGGTAACTTGAGAGCTTTCACCAAACAGGAGTTCAGATGTCTCGACTGCAACACCAAGTACAGACGGCCACCCCTCTCCGGAAGCTGTAGCTGCGGCGGAGACATAAATCTCACAGTCCACGAAGGAAGCGTAAAAAAATACCTCGACGTATCGCTACGTGTAGGTGAAGACTACGGCGTATCGGGATACACGCTCCAACGCCTCCGTCAACTCGAACGACAGATAAACAGCTTGTTCGAAGACGACAAAGCGAGACAGAGCGGAATAGCCGAGTTCATGTAG
PROTEIN sequence
Length: 273
GFTSASVGYAHPFFHAAKRRNCDGDEDCVMLLMDGLLNFSKSYLPDRRGGRMDAPLVLTTRVDPEEIDDEAHNVDKMSVYPRDFYLETLEIADPKDIRERVDLEVAEDTLGSVDAVSGFHHSVETDGIAVGPDNSAYKTLGSMLEKTEAQLEVGRKTRAVDEADVAERVVQSHFLPDLIGNLRAFTKQEFRCLDCNTKYRRPPLSGSCSCGGDINLTVHEGSVKKYLDVSLRVGEDYGVSGYTLQRLRQLERQINSLFEDDKARQSGIAEFM*