ggKbase home page

sw_10_scaffold_2110_9

Organism: SW_10_Halobacteriales_68_16

near complete RP 32 / 55 MC: 7 BSCG 28 / 51 MC: 3 ASCG 34 / 38 MC: 2
Location: 6201..6734

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHZ5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 178.0
  • Bit_score: 325
  • Evalue 3.10e-86
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 178.0
  • Bit_score: 325
  • Evalue 4.30e-86
tfbB; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 179.0
  • Bit_score: 319
  • Evalue 6.20e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 534
ATGACCGACACCACCACCACGAGACGAGACACGCGCGAGCGCGAATCCGAACAACAGGAGTCCGACCAGTCACAGGGACTCGTCTGTCCCGAGTGCGGGGGGAACCTCGTTTCCGACGCGGAGCACGGGGAGACGGTCTGTGAGGAGTGTGGCCTGGTCGTCGAGGAGGACGAGATCGACCCCGGGCCGGAGTGGCGGGCCTTCGACGCCCGCGAGAAAGACGAGAAGTCCCGCGTCGGTGCCCCCACCACCAACATGATGCACGACAAGGGGCTCTCGACGAACATCGGCTGGCAGGACAAGGACGCCTACGGCAACGCCTTATCCTCGCGCCAGCGCGAGAAGATGCAACGGTTGCGGACCTGGAACGAACGCTTCCGCACCCGCGATTCGAAAGAGCGCAACCTCAAGCAGGCCCTGGGCGAGATCGACCGCATGGCCTCCGCGCTCGGTCTCCCCGAGAACGTCCGCGAGACCGCCTCCGTCATCTACCGCCGGGCCCTCGACGAAGACCTCCTGCCCGGCCGCTCCATC
PROTEIN sequence
Length: 178
MTDTTTTRRDTRERESEQQESDQSQGLVCPECGGNLVSDAEHGETVCEECGLVVEEDEIDPGPEWRAFDAREKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNALSSRQREKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSI