ggKbase home page

sw_10_scaffold_783_5

Organism: SW_10_Halobacteriales_68_16

near complete RP 32 / 55 MC: 7 BSCG 28 / 51 MC: 3 ASCG 34 / 38 MC: 2
Location: comp(3077..3637)

Top 3 Functional Annotations

Value Algorithm Source
TATA-box-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1A7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 186.0
  • Bit_score: 358
  • Evalue 3.40e-96
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 186.0
  • Bit_score: 358
  • Evalue 4.80e-96
TATA-box binding family protein similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 186.0
  • Bit_score: 355
  • Evalue 1.10e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 561
ATGGTCGATCCAAAAGAGACAATCAACATCGAAAACGTCGTCGCCTCGACGGGAATCGGGCAGGAACTCGACCTGCAGAGCGTCGCGATGGACCTCGAGGGGGCCGACTACGACCCAGAGCAGTTCCCCGGGCTGGTCTACCGGACACAGGACCCGAAGTCGGCGGCACTCATCTTCCGGTCGGGCAAGATCGTCTGTACCGGCGCCAAGAGCACCGACGACGTCCACCAGAGCCTGCGCATCGTCTTCGACAAACTGCGCGATCTGAACATCCAGGTCGACGAACAGCCGGAGATCATCGTCCAGAACATCGTCACGTCGGCGGACCTGGGCCGGAACCTCAACCTCAACGCCATCGCCATCGGGCTCGGGCTGGAGAACATCGAGTACGAACCCGAGCAGTTCCCGGGACTGGTCTACCGGCTGGACGACCCCGACGTCGTGGCGCTGTTGTTCGGCTCGGGCAAGCTCGTCATCACGGGTGGCAAACAGCCCGAGGACGCCGAGGAGGCCGTCGACAAGATCGTCTCGCGACTCGAGGACCTGGGTCTGCTGGAGTGA
PROTEIN sequence
Length: 187
MVDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTGAKSTDDVHQSLRIVFDKLRDLNIQVDEQPEIIVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKQPEDAEEAVDKIVSRLEDLGLLE*