ggKbase home page

sw_10_scaffold_9188_1

Organism: SW_10_Halosimplex_carlsbadense_68_20

partial RP 15 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 15 / 38
Location: comp(76..1173)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=797114 species="Archaea; similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 379.0
  • Bit_score: 463
  • Evalue 3.50e-127
tRNA splicing endonuclease (EC:3.1.27.9) similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 374.0
  • Bit_score: 452
  • Evalue 9.60e-125
tRNA-splicing endonuclease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2U7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 379.0
  • Bit_score: 463
  • Evalue 2.50e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1098
ATGGACGCGACGCTGGCCGACGGCGTCGTCCGGGCCGGCACGGACGCCCGCGAGCGCTTCTACGACTCGCGGGGCTACGGCCACCCGGTCGACGGCGGGGAACTCGAACTCGCGCCCGTCGAGGCCGCCCACCTCCTCTACCGGGGCGACATAGACGCCGTCGACGGGCAGTCGTTCCGGACCGTCCTGACCTCCGCCGCCGTCTCCGAGACGGCCTTCCTCGTCTACAAGGACCTGCGCGACCGCGGGTTCTACCTCTCGCCCGCCCGCGAGGCCTGGACCGCCGACGGGCTCGCCCTCGGGGAAGGCGCGAGCGCCGACTTCGTCGTCTACCCCCGCGGGTCGGGTCCGTGGGACGGCGACGTCGCGTATCGCGTCAGGGTGGTCGGCGAGCGCGAACCCGTCGCGGCCGCCACCCTGGGGGAGGCCGTCCTCGCCGTCGTCGACGAGGAGAGCGAGATAACCTACCTCGAAACCGCACGCCCCGACATCGCGGGATCAACCGCGATGGACCTCCCCGAGGGCGTCCCCGCGGAACTGCTCGCCGAGCGGGCCTTCGTCTGGGACCCGCCGGCGCACCTCTACGAGTCGGGCTTTTTCGGCCAGCGACTCGACGACGGCGACGGCAAGGTCCTGCAACTGTCGCTGGTCGAGGCCGCCTACCTGGCCCACCACGGGGCGCTCGCGGTCACCGGCGGCGCCGAGGGGGTCGTCGAACGGGGTCGCGAGGCGGATAGCGAGGCGCAGAGCGCCTCGGAACGGACGAGCGGACCCGAGGGCCCGCGAGTCGAAGGGGAGCGGTTCGACCGCCGCCTGCGCGCGTACACGGAACTGCGCGAGCGCGGCGTCGTCCCCAAGACCGGGTTCAAGTTCGGCGCCGACTTCCGCACCTACGCCGACGTCGACTCCGTCGACAGTCTCGGCCACTCGGAGCGGCTCGTGCGCGTCCTCGACGCCGACCACGCGTTCGCGCCGCGGGACCTGGCGCTGGACGTCCGCCTCGCCCACGGCGTCCGCAAGGAGATGGTCTTCGCGCTCGTCGAGGACGGACCCGACGCTGGCGTCGAGTGGGTCTCGGTTAACCGGTTGACGCCGTGA
PROTEIN sequence
Length: 366
MDATLADGVVRAGTDARERFYDSRGYGHPVDGGELELAPVEAAHLLYRGDIDAVDGQSFRTVLTSAAVSETAFLVYKDLRDRGFYLSPAREAWTADGLALGEGASADFVVYPRGSGPWDGDVAYRVRVVGEREPVAAATLGEAVLAVVDEESEITYLETARPDIAGSTAMDLPEGVPAELLAERAFVWDPPAHLYESGFFGQRLDDGDGKVLQLSLVEAAYLAHHGALAVTGGAEGVVERGREADSEAQSASERTSGPEGPRVEGERFDRRLRAYTELRERGVVPKTGFKFGADFRTYADVDSVDSLGHSERLVRVLDADHAFAPRDLALDVRLAHGVRKEMVFALVEDGPDAGVEWVSVNRLTP*