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sw_10_scaffold_3117_4

Organism: SW_10_Halococcus_67_32

partial RP 21 / 55 MC: 3 BSCG 16 / 51 MC: 2 ASCG 22 / 38 MC: 2
Location: comp(2455..3297)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1227456 similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 281.0
  • Bit_score: 434
  • Evalue 1.00e-118
tRNA pseudouridine synthase Pus10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2P2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 281.0
  • Bit_score: 434
  • Evalue 7.40e-119
tRNA pseudouridine 55 synthase archaea similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 256.0
  • Bit_score: 297
  • Evalue 3.00e-78

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 843
GGCTATCTCTACGAGGAGAGCGTCGAGGAGCTGACCGCGCCCGTGGTTCGGGACGCGATGGACGGAACCGAGGCGGTGTTCCACGGCGCGGGCCGCGAAGACGTCGACGCACGCACGCTCGGTACCGGTCGACCGTTCGTGATCGAGGTCAAGGAGCCAGGCCGCCGCGCGATCGACCCCACGGCGCTCGAACACGAGATCGACGACTTCGCCGACGGCACGGTCGAGGTCGAGGGACTCCGGCGCGCGACTCACGAGATGGTCGAACGCGTGAAGGAACTCGATGCCCACAAGACCTACTCGATGAGTGTGACGTTCGCCGAGCCCGTCGCCGAACGGGCGTTCGCGGACGCACTCGCCGCCCTTGATGGCGCGATGATCGCCCAGGACACCCCCGAGCGCGTCGATCATCGTCGGGCGAGTCGTACCCGCGAGCGCACGGTGTACGAGATCGACGGCGCGCTCGAACCCGACGGCGACGCCGGAACCGCCAGCACCCGCGACATCGATCCTGCCGATAGCGCAACCGACGCCGATGCCGCTACCGACGCGAACGCCGACGGCGAGGACGGCGCACGCCGCGCGACGGTCGAACTCCGTGGTGAGGGCGGGCTCTACGTCAAGGAGCTCGTGAGCGGCGACGGCGACCGGACCGAGCCGAGCCTCGCGGGGCTGCTCGGGGTCGACGCCACGGTCACGGCGCTCGATGTCCTTGCTGTCGAGGGCGAGGACGAACCGTTCGCAACGCCCGAGTACGTTGTCGAGAGCGGCAGCGATGGGGACGCAGACGACACAGACAAGCACACGAACGACGGCGAAGGCGAGGCTCGGCGGAACGGTTAA
PROTEIN sequence
Length: 281
GYLYEESVEELTAPVVRDAMDGTEAVFHGAGREDVDARTLGTGRPFVIEVKEPGRRAIDPTALEHEIDDFADGTVEVEGLRRATHEMVERVKELDAHKTYSMSVTFAEPVAERAFADALAALDGAMIAQDTPERVDHRRASRTRERTVYEIDGALEPDGDAGTASTRDIDPADSATDADAATDANADGEDGARRATVELRGEGGLYVKELVSGDGDRTEPSLAGLLGVDATVTALDVLAVEGEDEPFATPEYVVESGSDGDADDTDKHTNDGEGEARRNG*