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sw_11_scaffold_10484_3

Organism: SW_11_Halococcus_67_16

partial RP 15 / 55 MC: 3 BSCG 13 / 51 MC: 2 ASCG 20 / 38 MC: 1
Location: comp(1371..2180)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1A8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 270.0
  • Bit_score: 486
  • Evalue 1.60e-134
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 270.0
  • Bit_score: 486
  • Evalue 2.20e-134
tfbA2; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 280.0
  • Bit_score: 457
  • Evalue 2.20e-126

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 810
ATGAGCGACACAACGACCCGAATCAACCGCGAGGAAGAGACCCGAGAGACCGAGACCGAACAGGAAGAGGAGGCCCCCGAGGACGAGCTGGTCTGCCCGGAGTGTGGCGGCCGCCTCGTGAGCGACACCGAGCACGGGGAAACGGTGTGTACCGACTGTGGGCTGGTGGTCGAGACCGACGAGATCGACCGTGGCCCCGAGTGGCGGGCGTTCGATTCGGCCGAGCGCGACCAGAAGTCCCGCGTCGGGGCCCCGACGACGAACATGATGCACGACAAGGGCCTCTCCACGAATATCGGCTGGCAGGACAAGGACGCCTACGGCAACAGTCTCTCCAGCCGCCAGCGCCAGAAAATGCAGCGCCTCCGCACCTGGAACGAGCGCTTCCGGACGAGGGACTCCAAGGAGCGCAACCTCAAACAGGCCCTCGGCGAAATCGACCGGATGGCGAGTGCGCTCGGTCTTCCGGATTCGGTCCGCGAGACCGCGAGCGTCATCTACCGCCGTGCGCTCGACGAGGACCTCCTCCCTGGACGCTCGATCGAGGGCGTCTCCACCAGTGCGCTGTACGCCGCCGCGCGCCAGGCCGGCACGCCCCGATCGCTCGACGAGATCGCCACCGTCTCCAGGGTCGAAAAGAGCGAGGTCGCCCGGACGTACCGGTACGTGGTGCGCGAGCTCGGCCTCGAGATCCAGCCCGCCGATCCCGCGAGCTACGTCCCCCGGTTCGCCTCCGATCTCGACCTCTCCGAGGAGGCCGAACGCCGCGCTCGACAGCTCCTCGACACCGCGAAGGCCGAAGGCGTCTAG
PROTEIN sequence
Length: 270
MSDTTTRINREEETRETETEQEEEAPEDELVCPECGGRLVSDTEHGETVCTDCGLVVETDEIDRGPEWRAFDSAERDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDSVRETASVIYRRALDEDLLPGRSIEGVSTSALYAAARQAGTPRSLDEIATVSRVEKSEVARTYRYVVRELGLEIQPADPASYVPRFASDLDLSEEAERRARQLLDTAKAEGV*