ggKbase home page

sw_12_scaffold_1201_3

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(984..2177)

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel MscS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUS1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 376.0
  • Bit_score: 545
  • Evalue 5.50e-152
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA49053.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 376.0
  • Bit_score: 545
  • Evalue 7.70e-152
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 346.0
  • Bit_score: 336
  • Evalue 1.10e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1194
ATGAACCTCTTCAACGTCGCGAGACGGTTACAGAACGCGTACTTCCAGACGTTCGGCGAGAAACTGCTCGGTACGATCGTGCTGTTCGCGCTGCTGGCGGTGATCGGCGAGGCCATCAGGCGGGCGGGCCGGCCGCTCAAACGACGCTACAGTTCGCGGCTGACCGAGGCGGTCCAGGCCGGCACGGTGACGGTGCTCGTCCTGTTCGTGGTCCTCGCGCTCGCCGTGATCTGGCACGTCACGGGGTTCGTACAGTTCCTCGTCAAGTCGTCGGCGATCAGCCGTTTCGACGCCGCTCGCGGACTGCTCACCGTCGCCGTTCTCGTGATCGCCTACCTCCTCGTCCGACTCATCAACCGCTCGATCGACCGGCTCTCGCTGGAACAGGACGTGATTTCCGACCACCAGAGCGAGGTCGCCTACCACGTCGCCGACGTCGGGGTGTTCGTGGTCGCGTTCGTGGTGATTCTCACTATCTGGCAGGTCGATCTAGGTCAACTGTTCATCGGCGCGGGGGTGCTCGGCGCGGTGCTCGGGTACGCGGCACGGGGCACACTCAGCGCGATCATCGCCGGGTTCGTGTTGCTGTTCTCGCGACCGTTCCGGGTGGGCGACTGGATCATCATCGAGGAGTACGAGGGCGTGGTCCGGGAGGTCACCATCGTCAACACCAAGATCCGGACGTTCGACGACGAGCACGTGCTGATCCCGAACGACGAGATCACCAACAACTTCCTCGTCAACCGCACGCGGAACGACCGATACCGGGTCGACATCGACGTGAGCGTGGACTACGACACCGACCTCGGCGAGGCGATGGACGTGACGACGGACGCGATGGAAGGGTGTGACGACCGGATCAGAGAGCAGCCCTCGCCGCGGGCGGTGTTGAAACGCTTTGCGGACTCGGGGATCGTCCTCGAACTCCGCTTTTGGGTCGATAACCCGAGCGCGAGGCGCGTCTGGGAGGCGAGGAGCGCCGTCGTGCAGTCGGTGAAGGAAGCCTTCGACCGCGAGGGGATCGTCATCCCGTTCCCCCAGCGNNNNNCCTCGACGACCGGCGGGAACACGACCGGGTCTACCAGGCCGCCGAGGACTCGGCTCTCCTCGCGACCGCGGCGGTTGCGGCGGCCGAGCCGACCGACCGCGTGCTCGACGTCGGCACCGGGTCGGGCTACGTCGCGGCACGGGTGA
PROTEIN sequence
Length: 398
MNLFNVARRLQNAYFQTFGEKLLGTIVLFALLAVIGEAIRRAGRPLKRRYSSRLTEAVQAGTVTVLVLFVVLALAVIWHVTGFVQFLVKSSAISRFDAARGLLTVAVLVIAYLLVRLINRSIDRLSLEQDVISDHQSEVAYHVADVGVFVVAFVVILTIWQVDLGQLFIGAGVLGAVLGYAARGTLSAIIAGFVLLFSRPFRVGDWIIIEEYEGVVREVTIVNTKIRTFDDEHVLIPNDEITNNFLVNRTRNDRYRVDIDVSVDYDTDLGEAMDVTTDAMEGCDDRIREQPSPRAVLKRFADSGIVLELRFWVDNPSARRVWEARSAVVQSVKEAFDREGIVIPFPQXXXSTTGGNTTGSTRPPRTRLSSRPRRLRRPSRPTACSTSAPGRATSRHG*