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sw_12_scaffold_1329_3

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(1473..1766)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 97.0
  • Bit_score: 205
  • Evalue 3.50e-50
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF59_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 97.0
  • Bit_score: 205
  • Evalue 2.50e-50
tfs2; transcription elongation factor TFS similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 98.0
  • Bit_score: 162
  • Evalue 6.90e-38

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 294
ATGATGCACGCCGACGGCGACGAGATGGTGTGTGCGGACTGCGGCGAGCGCGTGCCGAAGAACGCGGATCGCGCGGCGGCGTTCGTGAGCACCGAATCCCAAACCACCGACGACGTGATCGAGACCAGCGAGAACGCTGCCGACGAGGGCAAACCCACTGCTGAAGTGACGTGTGACGAGTGTGGCAACGATCGTGCGTGGTACACCATCAAACAGACCGGCTCGGCCGACGAACCGCCGACACGATTCTTCAAGTGTACCGAGTGCGGCCACCGCTGGCGCGGGTATAGCTGA
PROTEIN sequence
Length: 98
MMHADGDEMVCADCGERVPKNADRAAAFVSTESQTTDDVIETSENAADEGKPTAEVTCDECGNDRAWYTIKQTGSADEPPTRFFKCTECGHRWRGYS*