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sw_12_scaffold_3463_4

Organism: SW_12_Salinibacter_ruber_64_31

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1872..2996)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659133 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 368.0
  • Bit_score: 620
  • Evalue 9.70e-175
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBH24296.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 366.0
  • Bit_score: 611
  • Evalue 8.30e-172
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 366.0
  • Bit_score: 611
  • Evalue 1.70e-172

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1125
ATGTCGCCAGATACGTTTGACCCTGTCGAGTACGACGCCGACGTGACCCGGGAGGAGAACGTCGTGGAAGTGGTGGTGCCGGAGGCGGAGACCGGGGGAACGCGCATCGACAAGTACCTCACCCGCTTCTACCCCGAGGCCTCGCGCACCAAGATCCAGTGGTCCATCAAGAAGGGGCACCTCAAGGTGAACGGCGCGGACGTGCAGAAGTCGTATGCCGTGGTGCCGGGGGACCGCATCGTCTTTCGGCTCATCCGCAAGCCGCCGATGCAGGCAGAACCGGAGCCGATTCCACTCGACATTGCGTACGAGGACGAGAATCTGCTCGTAGTGAACAAGCCCGCAGGCATGGTGGTGCATCCGGCGCCGGGCCACCGGTCGGGCACGCTCGTCCACGCCCTGCTGCACCACGTGGAAGGGGAGACGGTGGCCGCGGACGATGAGTTGGACGCCACAAACGACGAAGACGTGGGCCTGTCGGTGGTCAATGCGCTCCCCGAGGCGCCGGATCATCCCGTCGTGCGCCCCGGCATCGTGCACCGGCTGGACAAGGGCACCTCCGGGCTCCTGGTGGTCGCCAAGCGCGACCGGGCCCACCGGCTGCTGGCGGAGCAGTTCAAGGCGCACACTGTGGAGCGCCGGTACCGGGCGATCGTGTGGGGCCAGTTCGAGCCGCCACATGGCACCATTGAGGGGGCCATCGGCCGCGATCCGAATCACCGACAGCGCATGGCCGTGGTGCCGGAGGCCGAGGGCAAGTGGGCCGTCACCCACTACGAGACCGTGGAGACACACGTTCACACCTCCGTCGTCGACTTTCAATTGGAAACCGGACGCACCCACCAGATCCGCGTCCACGCCCGCTCGCAGGGCCACCCGCTGCTTGGGGATCCGAAGTACGGCGGGCAAAGAATTCGGTACGGGACGCAGAGCGAGGCGCGACGATCCTTTTTTGAGCGTCTGTTCGACGTGCTTCCGCACCCGGCGCTGCACGCGTACCGGCTCGGTTTCACGCATCCCGCCACCGGCGAGACGATGCACTTTGAGGCCGATCCGCCGGACGAGTGGCGGCACCTGCTCGATCGGCTGCGGGCCGAGGAAGGGGAGGACGGAGATTCTCGGTAA
PROTEIN sequence
Length: 375
MSPDTFDPVEYDADVTREENVVEVVVPEAETGGTRIDKYLTRFYPEASRTKIQWSIKKGHLKVNGADVQKSYAVVPGDRIVFRLIRKPPMQAEPEPIPLDIAYEDENLLVVNKPAGMVVHPAPGHRSGTLVHALLHHVEGETVAADDELDATNDEDVGLSVVNALPEAPDHPVVRPGIVHRLDKGTSGLLVVAKRDRAHRLLAEQFKAHTVERRYRAIVWGQFEPPHGTIEGAIGRDPNHRQRMAVVPEAEGKWAVTHYETVETHVHTSVVDFQLETGRTHQIRVHARSQGHPLLGDPKYGGQRIRYGTQSEARRSFFERLFDVLPHPALHAYRLGFTHPATGETMHFEADPPDEWRHLLDRLRAEEGEDGDSR*