ggKbase home page

Ig7659_scaffold_23_11

Organism: bjp_Ig7659_Hor_218_2015_Burkholderiales_66_12

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9390..10856)

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA 5-methyluridine methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] id=5081339 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 488.0
  • Bit_score: 965
  • Evalue 2.70e-278
  • rbh
rumA; 23S rRNA 5-methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 481.0
  • Bit_score: 770
  • Evalue 2.10e-220
  • rbh
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 488.0
  • Bit_score: 965
  • Evalue 3.80e-278

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGACCGCAACCCTCGCCCACGAAAACAGCCTGCTCACCACCGCGCGCGACGACGCGCCCGCCGCTCCCGAAACCACTTTGCCGGAAGGCTGGCTGGCGGTGGAATCCCTTGACATCGATGCCCAGGGCATTGCCCGCCGCCCGGATGGCAAAGTCGTCTTCATCGAAGGCGCCTTGCCTTTTGAAGTCGTCAGCACCAGCGTGCACCGCAAGAAGAACAACTGGGAGGCGGGCGTCGTCACCGCCATTCACCGCGAATCCTCGCAGCGGGTGCGCCCGGGCTGCCCGCACTTCGGCCTGCACGCCGGTGCCTGTGGTGGCTGCAAGATGCAGCACCTGCACGAGACCGCGCAGGTGGCTGTCAAGCAGCGCGTGCTGGAAGACAATCTCTGGCACCTCGGCAAGGTCAGGGCCGAAATGATGCTGCGCCCCATCGAAGGGCCGGCCTGGAGCTACCGCTACCGCGCGCGCCTCTCGGTGCGCTTCGTGCACAAGAAGGGCGAAGTGCTGATCGGTTTTCACGAGCGCAAGAGCCGCTATGTGGCCGACATGAAGGTCTGCCACGTCTTGCCGCCCCACGTGAGCGACATGTTGATCCCGCTGCGCGGGCTGATCTTCGGCATGGACGCGCGCGAAACCTGCCCGCAGATCGAACTGGCCTGTGGCGACGACGTGACCGCGCTGGTGCTGCGCCATCTCGAGCCGCTGTCGGAGGATGACCTCACCCGTCTGCGAGCCTTTGCCGCCCAGCACGGCGTGCAATGGTGGCTGCAATCGAAAGGGCCGGACACCGTGAAGCTGCTCGACGAGGGCGGCCCCTTGTTGTCTTATGCGTTGCCCGATTTCGGCATCACCATGCCGTTCAAGCCCACCGACTTCACCCAGGTCAACCCGCACATCAACCGCGTGCTGGTCTCGCGCGCCTTGCGCCTGCTCGATGCACAGAAACACGAGCGCGTGATCGACTGGTTCTGTGGTCTGGGCAATTTCACCCTGCCGATCGCCACGCAGGCGGGCGAGGTGCTGGGCATTGAAGGCAGCGAAACGCTGGTGGCGCGCTCGCGCGAGAACTTGGCGGGCAACCAGACCGGTCGATCGGTGCCGCTGGCGCCCACGGCGTTTGTCGCGCGCAACCTGTTCGAGATGACACCTTCGCAACTGGTGGGCGACGGCCAGGCGGACAAATGGCTGGTGGACCCGCCCCGCGAGGGTGCGTTTGCGCTGGCCAAGACGCTGGCCGACCTGCACCTGCGGCCCGAATTGCGCGGGGGCTGGAAGCCGCCGAAACGCATCGTCTACGTGAGCTGCAACCCGGCCACGCTGGCGCGCGATGCGGGCCTGCTGGTGCACCAGGCGGGTTACCGCTGTGTGGCGGCGGGTGTGGTCAACATGTTCCCGCACACCGCGCATGTGGAGAGCATGGCGGTGTTCGAGCTGGACGCCGAACGCGTGGCTGGCGCTGCCTGA
PROTEIN sequence
Length: 489
MTATLAHENSLLTTARDDAPAAPETTLPEGWLAVESLDIDAQGIARRPDGKVVFIEGALPFEVVSTSVHRKKNNWEAGVVTAIHRESSQRVRPGCPHFGLHAGACGGCKMQHLHETAQVAVKQRVLEDNLWHLGKVRAEMMLRPIEGPAWSYRYRARLSVRFVHKKGEVLIGFHERKSRYVADMKVCHVLPPHVSDMLIPLRGLIFGMDARETCPQIELACGDDVTALVLRHLEPLSEDDLTRLRAFAAQHGVQWWLQSKGPDTVKLLDEGGPLLSYALPDFGITMPFKPTDFTQVNPHINRVLVSRALRLLDAQKHERVIDWFCGLGNFTLPIATQAGEVLGIEGSETLVARSRENLAGNQTGRSVPLAPTAFVARNLFEMTPSQLVGDGQADKWLVDPPREGAFALAKTLADLHLRPELRGGWKPPKRIVYVSCNPATLARDAGLLVHQAGYRCVAAGVVNMFPHTAHVESMAVFELDAERVAGAA*