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sw_4_scaffold_4531_3

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 1058..1600

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 172
  • Evalue 4.70e-40
YebC/PmpR family DNA-binding regulatory protein id=5803211 bin=OD1_GWC2_34_28 species=unknown genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 182.0
  • Bit_score: 164
  • Evalue 1.20e-37
YebC/PmpR family DNA-binding regulatory protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 184.0
  • Bit_score: 132
  • Evalue 1.10e-28

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Taxonomy

RLO_RIF_OD1_10_39_16 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAGTGGTTCCAACCGTTGGTCAAAAATAAAACGCAAGAAAAAGAAAAAGGATAAAGCGCGATCGAAGAAATTCTCTAAATTAGTTGAGAAAATACAGTCTGCCGCAAAGGAATGTGACGGTAACCGCGATAATCCGCGACTTTCACAGCTGATAGAGCAAGCAAAAGAGGCAGATATGCCCAAAGACAATATTGAGGACGCGATCGAGCGAGCACTCTCTGAAAAAGAGGGTGAGAAAGAGATAGCCTATGAGGCGTACGGTCCGGGCGGTGTGGCGATGATTATCGAGACACACTCCTCCAACCGCAATAAATCCGCAGCAGAGATTCGGCATATACTCGATACGCACGAATGTACGCTTGGTAAACCAGGTGATACAAAATGGGCATTTGATCAAAAGCGGGATACGCAGGACAATCGTGTATTTATTCCACAAAACACTATACCTGTGTCCGAGGAGGACAAAACGAACCTGAAAGATCTTATAACAGATTTAAAAGAAAATGAGGAGGTAGAGGCGGTGTTTACAAATGCTGAGTGA
PROTEIN sequence
Length: 181
MSGSNRWSKIKRKKKKKDKARSKKFSKLVEKIQSAAKECDGNRDNPRLSQLIEQAKEADMPKDNIEDAIERALSEKEGEKEIAYEAYGPGGVAMIIETHSSNRNKSAAEIRHILDTHECTLGKPGDTKWAFDQKRDTQDNRVFIPQNTIPVSEEDKTNLKDLITDLKENEEVEAVFTNAE*