ggKbase home page

sw_4_scaffold_556_2

Organism: SW_4_Bacteroidetes_Order_II__Incertae_sedis_67_19

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: comp(1012..1698)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CBH24877.1}; EC=5.4.99.- {ECO:0000313|EMBL:CBH24877.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 216.0
  • Bit_score: 222
  • Evalue 5.00e-55
Ribosomal large subunit pseudouridine synthase D n=2 Tax=Salinibacter ruber RepID=D5HA22_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 216.0
  • Bit_score: 222
  • Evalue 3.60e-55
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 216.0
  • Bit_score: 222
  • Evalue 1.00e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 687
ATGCGAGTGGACGAAACCGACGTGCTCCACTGCGACGCGCATCTGCTGGTGGCCTGCAAGCCGCCGGGCGTACTCGCGCAGCCCGACCACACCGGCGACGCGGACCTGATCGCGCTGGGGAAGACGTTTATACGCGGGAGCGAGGACGCGGGCGCCGACCCGTTTCTGGCCCCGGTCCACCGCCTGGACCGGCCCGCCGGCGGCGTCACGGCACTGGCGCGCACCTCCGAGGCGGCGAAGCACCTCGCGCGCCAGTTCCGCGAGCGCACCGTGGACAAACGCTACTTGGCCGTCATCGAGGGCACGGGCGCAGGCTTCGGCGCGCTCGACGGCTACATCGCCAAGACGGACCGGGCCCCGCGCCTCACTGGCCCCGACGATCCCGAGGGCCGTTGGGCGCGCCTCCAGTACCAGACCCTCGCCGAGAAGGACGGCTTGAGCTTGTTGCTGGTGCGCCCCGAGACGGGCCGCCCGCACCAGATTCGCCTCCAGCTCGCCGATTACGGCTTCCCCATCCAGGGCGACTTGCGCTACGGGGCCGAGCGCGAACTGGACGGCCGAAACCTCGCCCTCCACAGCTACATGCTGGCCTTCGAGCACCCTGCCGAGGAGCGGCGCGTTTCCTTCTCTGCGAATCCGCCGGACACGTGGCCCGAACGCTTCGCCGACGATATCGGACGCCTTTAA
PROTEIN sequence
Length: 229
MRVDETDVLHCDAHLLVACKPPGVLAQPDHTGDADLIALGKTFIRGSEDAGADPFLAPVHRLDRPAGGVTALARTSEAAKHLARQFRERTVDKRYLAVIEGTGAGFGALDGYIAKTDRAPRLTGPDDPEGRWARLQYQTLAEKDGLSLLLVRPETGRPHQIRLQLADYGFPIQGDLRYGAERELDGRNLALHSYMLAFEHPAEERRVSFSANPPDTWPERFADDIGRL*