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sw_4_scaffold_1971_1

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: 3..704

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase epsilon subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG53_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 232.0
  • Bit_score: 336
  • Evalue 2.30e-89
DNA-directed RNA polymerase epsilon subunit {ECO:0000313|EMBL:EMA43400.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 232.0
  • Bit_score: 336
  • Evalue 3.20e-89
DNA-directed RNA polymerase epsilon subunit similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 218.0
  • Bit_score: 245
  • Evalue 2.00e-62

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 702
CGGTGGATCGACTGTGGCACCGACGGCCGTTCGACTGAGCCGGCGACCGGGCGACAGCGCCGTCGCACGGGCCGACCTCCAGCGCGACGAGACCGTTTGGTCGGTGGGGGCCTGGTCACGCCGAGCGCGACCCGGATCGGCCGGGCGGATTCGCCCGAAAACGACCTCTCGGAGAGCGTCCGCCGGCTTCACGACGAGCGCCACCCGGCGACGGAGGGGTACAGCCGACGCGCCCACCGTCTCGAAAAGCTCCGGCTGACCCACGCGCTGTGTGGCGACCTCGCGCTCACGCCGTGGCAGCGCGACCGCGTCATCGGGATCATGGTCGATCTCGATCTCATCGCGTTCGGGAGCCAGCGCGCGATCCCCAAGGTCACGCTCGTCGTAATCCGCCACGTGGTTGAGCGCGAGCGCGAGCGCCACCTCGGTCTCCACGACGACGAGTGGATCGCCGAACAGTCGCCCGAGCGGCTCGCCGATCGCTACGACCAGTTCCGCTCGATCACCGATGAGGACCGCTTCGACGCACTCTGTGCGTCCTACGACCTCGACGTGACGAACCTCAACCGGCTGCGCCGAACCTTGACCGAGCAGCTTGACGACCAAGGCCTCCACGACGCGGTGTACGGCCGCAACCCCTACCGCGACCCGAGCCTGCCGAGCCTCGGCTCCCGCGCCGCGACGGCCGACTCCGGCGGGTAG
PROTEIN sequence
Length: 234
RWIDCGTDGRSTEPATGRQRRRTGRPPARRDRLVGGGLVTPSATRIGRADSPENDLSESVRRLHDERHPATEGYSRRAHRLEKLRLTHALCGDLALTPWQRDRVIGIMVDLDLIAFGSQRAIPKVTLVVIRHVVERERERHLGLHDDEWIAEQSPERLADRYDQFRSITDEDRFDALCASYDLDVTNLNRLRRTLTEQLDDQGLHDAVYGRNPYRDPSLPSLGSRAATADSGG*