ggKbase home page

sw_4_scaffold_2080_5

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: comp(4559..6187)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type ribose transport system, ATP-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EK08_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 538.0
  • Bit_score: 761
  • Evalue 5.10e-217
ABC-type ribose transport system, ATP-binding protein {ECO:0000313|EMBL:ELZ46764.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 538.0
  • Bit_score: 761
  • Evalue 7.20e-217
tsgD11; putative sugar ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 522.0
  • Bit_score: 740
  • Evalue 2.60e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum coriense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1629
ATGAGCCAGCCCGCAGTCGAGTTACGCGAGATCACGAAGCGCTTCCCGGGGGTCGTGGCCAACGACGAGGTCGACCTCACCGTCGAGCGGGGGTCGGTTCACGCCTTGCTGGGCGAGAACGGCGCCGGCAAGACGACGCTGATGAACGTCCTCTACGGGCTGTACGAACCCACCGACGGGACCGTGGTCGTCGACGGCCGGGAGCGCGGATTCAACTCGCCGCGGGACGCCATCGACGCCGGCGTCGGCATGATCCACCAGCACTTCATGCTGGTCGACCCGATGACCGTCACCGAGAACATCACCCTCGGGAACGAACCCCGCCGGTTCGGCGGCCTGGCGGTCGACCGCGAGCGCGCCCGCCGGGAGGTCGTCGAGCTGAGCGAGCGCTACGGCTTCGACGTCAACCCCGACGCCCGCATCGAAGACGTCTCCGTCGGCGTCCAGCAGCGCGTCGAGATCCTCAAGGCCCTCTACCGGGGCGCGGACGTCCTCGTCCTCGACGAACCGACCGCCGTGCTCACCCCCCAGGAGGTCGAGGACCTGTTCGCCGTGCTCGCGGAACTCACGGACCAGGGCAAGACGATCGTCTTCATCACGCACAAACTCGGCGAGGCGATGACCGCCGCCGACCGGATCACGGTGCTCCGGGACGGGCGCAACGTCGGCAGCGTCGCCGCCGACGAGACCACCCGCGAGGAACTCGCCGAGTTGATGGTCGGTCGCGAGGTGCTCCTGGACGTCGACCGCCCGGCGACCGACTTCGGCGACGAGGTGCTCGACGTGGCGGGCCTGACGGTCACCGACGAGCGGGGCGTCCGCGCGGTCGACGACCTCTCGCTGTCGGTCCGGGAGGGGGAGATATTCGGCGTCGCGGGCGTCGACGGCAACGGCCAGCGCGAACTCGTCGAGGCGATAACCGGGCTGGTCCGGCCCGACGACGGGACGATACGGCTCGAAGGCGCGGACCTGACCGACCGGTCGCGGCGCGAGCGCATCGAGGCGGGGATGTCCTACGTCCCGGAGGACCGCCAGGAGCAGGGGCTGGTCATGGAGTTCGCCCTCGTCGAGAACGCCATCCTGGGGAGCCAGCACGCACCCCCCTTCGCCCGGGACGGTCGTCTCGACTGGGACCGGGCGGGCGAACACGCCGACTCGGTCGTCTCCGAGTACGACGTCCGCCCCCCCGACGCCCGGACGGAGGCCGGGGACCTCTCGGGCGGCAACCAGCAGAAGTTCGTCGTCGGCCGGGAACTGGAGCGCGACCCCACGCTGCTGGTCGCGGCCCACCCCACCCGCGGGGTCGACGTCGGCTCCATCGAGTTCATCCACGAGCGCCTCCTGGAGTTGCGCGCCCAGGGGGTCGGGATCCTGCTGGTCTCCTCGAAACTGGCGGAGGTCCAGGCGCTCTCGGACCGCCTCGCGGTCATCTACGAGGGCGAGTTCGTCGACGTCGTCGACCCCGCCGACACCACCGAGGAGGAACTCGGCCTGCTGATGGCCGGCGAACGCCCCGATACGACGGGCGATCCCGGGACGGATCCGGCCGAACGCGGGGCGACCGAACCCCCGGAGGAGTCGACGGGTGAGACTAGGACCGCCAACGGGTCGGGGGGCGGTGGGGAGTGA
PROTEIN sequence
Length: 543
MSQPAVELREITKRFPGVVANDEVDLTVERGSVHALLGENGAGKTTLMNVLYGLYEPTDGTVVVDGRERGFNSPRDAIDAGVGMIHQHFMLVDPMTVTENITLGNEPRRFGGLAVDRERARREVVELSERYGFDVNPDARIEDVSVGVQQRVEILKALYRGADVLVLDEPTAVLTPQEVEDLFAVLAELTDQGKTIVFITHKLGEAMTAADRITVLRDGRNVGSVAADETTREELAELMVGREVLLDVDRPATDFGDEVLDVAGLTVTDERGVRAVDDLSLSVREGEIFGVAGVDGNGQRELVEAITGLVRPDDGTIRLEGADLTDRSRRERIEAGMSYVPEDRQEQGLVMEFALVENAILGSQHAPPFARDGRLDWDRAGEHADSVVSEYDVRPPDARTEAGDLSGGNQQKFVVGRELERDPTLLVAAHPTRGVDVGSIEFIHERLLELRAQGVGILLVSSKLAEVQALSDRLAVIYEGEFVDVVDPADTTEEELGLLMAGERPDTTGDPGTDPAERGATEPPEESTGETRTANGSGGGGE*