ggKbase home page

sw_4_scaffold_8392_1

Organism: SW_4_Salinibacter_ruber_66_13

partial RP 29 / 55 MC: 3 BSCG 28 / 51 MC: 5 ASCG 6 / 38 MC: 2
Location: comp(1..645)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF16_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 200.0
  • Bit_score: 178
  • Evalue 5.60e-42
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 200.0
  • Bit_score: 178
  • Evalue 1.60e-42
Type II and III secretion system protein {ECO:0000313|EMBL:ACY47466.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodo similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 200.0
  • Bit_score: 178
  • Evalue 7.90e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 645
ATGACCCGACGCCTACCAGTGTTCGCTCCTTGCCGCCGCCTCGCCGGCGCGTTTCTCGTCGCTGCGCTGCTGGTGCCAGCGGTCGCGCCCTCGCCGGCCGCTCATGCACAGCAGGACCGCCCCGATCGCGACCAAACGCGCAACGTGCCGCCCGACCAGGTCGTCTCGTTCGTGCCGTCGACGCCATTCAACGAGTTCATCCAGTTCATCAACCCGATCTTCGAGCGGGTGGCCGGCAAGACGGTCGTGGACCCGCAGGACCGCAACACGCCCATCGGCGTCTCGATCCAGGGAGCGCAGTTTTTTGACGCCTTCGAGGCGGTCCTCGCCGAACAAGGGCTCACCTACCGCGAGACGGAGCGCTTCTTCGTGATCGAGCAGGCCCCCGAGGAAGACCCTACGCCGACAGTGGACGGGGAAGGCGACGTGACCGCAGATGGGCAGGCGCAGCAGCAGCCGGCCACGATCAACACGCGCGAGATCGAAATCAACGCCATTCTCTTTGATCTCAACAAGACAAAGGCCCGCCAGCTGGGGCTGAACTGGAGCGCGCTCTTCGGGCCGCTTCAGGGCGGTGGGGCCGGCGGCGGCGTCGGCGGTGGAGGCGGCGCCGGCGGTGGAGGCGGCGTCGGCGGTGGAGGCGGT
PROTEIN sequence
Length: 215
MTRRLPVFAPCRRLAGAFLVAALLVPAVAPSPAAHAQQDRPDRDQTRNVPPDQVVSFVPSTPFNEFIQFINPIFERVAGKTVVDPQDRNTPIGVSIQGAQFFDAFEAVLAEQGLTYRETERFFVIEQAPEEDPTPTVDGEGDVTADGQAQQQPATINTREIEINAILFDLNKTKARQLGLNWSALFGPLQGGGAGGGVGGGGGAGGGGGVGGGGG