ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_6_scaffold_4589_4

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(1319..3142)

Top 3 Functional Annotations

Value Algorithm Source
Threonine-tRNA ligase {ECO:0000313|EMBL:KKP76565.1}; TaxID=1618892 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_35_21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 605.0
  • Bit_score: 651
  • Evalue 1.20e-183
Threonine--tRNA ligase id=1924358 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 593.0
  • Bit_score: 566
  • Evalue 4.60e-158
thrS: threonine--tRNA ligase similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 611.0
  • Bit_score: 510
  • Evalue 8.50e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWC1_35_21 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1824
ATGTCAGATTCCCAAAACAACCTAGATAAACTCCGCCACACCCTCGCCCATTTGCTCGCTCGAGCAACCTTAGAACATTACCCTGAAGCCAAACCCACTCTTGGCCCGCCGGTTGATGATGGCTTTTACTATGACATTGATTGTGGTGATACAGAGTTTTCTGAGGATGAGCTGGACAAAATTGAAGGAACGATGAAAGAATTTCTGGATGATTGGGAGCTTTTCCGTTCGTATGATGTTACTGCAGATGAAGCCCGGGAATTTTTTGCTGATAACGAGTACAAACTAGAACTCATTGATGACATTGCGGAAGCCGGTGATGATATAACGCTTTACTACTCCGGGCCGAAGGCAGACGCACCAGAAAAAGCGGATTTACTAGAGTCCGATGATACTATATTTCGCTCTGGATTTGTTGATTTATGTCGTGGCGGCCACGTTGATACCCCAAACAAAGACATTTCCGCTGATTCCTTTACGCTTGATACTGTCGCCGGTGCCTACTGGCGTGGTGATGAAGACAACCAAATGCTCACTCGTATTTACGGCCTTGCTTTTGCAACTGAAGACGATCTTGATGAATTTGTAGTAAACCGCAAAAAAGCCAAAAAGCGCGATCACCGCACGCTTGGACAAGAGCTTGATCTCTTTACTTTTTCCGATAATGTCGGTCCGGGCTTGCCGATGCTTTTGCCCAACGGTGAAATTATCCGCAATGAGCTTGAAACGTATTTAAATAACATCAAAGAAAAACACGATTATCAGTTCGTAAACATCCCCCACATTGCCAAACGCAAGCTTTATGAAAAAAGCGGCCATATGGGCAAATACGACGCCATGATGCCGACGTTTACCGACGACAGCAACACCGAATATGTTATGAAGGCGATGAACTGCCCACACCACTTTGAAATATACAACTCCCGGCAGAAAAGCTACCGTGATCTACCCCTGCGGATTGCCGAAAATACTACCGTGTATCGAAATGAAAAGTCCGGTGAACTGCATGGGTTGACTCGGGTTATTAATCTCATGCAGGATGATGCCCATCATTTCATTCGCCCGGATCAGATTAATGATGAGATTCAGATGATCCTGGATATTATGGAGAACGTGTACGGCACGCTTGGTTTTGGTGATTACGAAATACAGATTTCTGTTCGTGATGCTGATTCGGATCAAAAATATTTCGGTGATGATAAAATCTGGAAGCGTGCCGAGTCAATCCTTGTTGACGCTGTCAACGAACGTGATATTCCCTACGAAAAAGTACCTGGTGAAGCTGCCTTTTATGGGCCCAAAATTGATGTCATGGTCTCTGATGCTCTCGGCCGGCAGTGGCAACTGACAACCGTGCAGCTTGATTTCGTTCAGCCGGATAACTTTGATATGACCTACACCGGCGAAGACGGCGAAGACCATCAGGTTGTCGTTATTCATGCCGCAATCTTAGGTTCGTTTGAGCGGTTTATGGGTGTGCTCATTGAACACACCGGCGGTGACTTTCCGCTGTGGTTGTCACCAACACAGGTCGCCCTGCTTCCTGTTGGTGATGACCACGAAGCAGTTACAGATGATATTGCTAAAAATCTCGAGTCGGCCGGAATCCGTACGGTGATCTACGGACCAGATGAGTCTGTCGGTAAACGCATCCGTAATGTGCATGAGAATAAAGTTCCGCTTTTTGGTGTTGTCGGTGATGATGAGGTGGATGCTGATGAGATCACCGTTGAAAGTCGACGTGATGATATTGATGATATTACAACGGAAATAGATGGTGTGGCAGAACGTATTCAGGAGCTTATTGATAATACCGACAACTAA
PROTEIN sequence
Length: 608
MSDSQNNLDKLRHTLAHLLARATLEHYPEAKPTLGPPVDDGFYYDIDCGDTEFSEDELDKIEGTMKEFLDDWELFRSYDVTADEAREFFADNEYKLELIDDIAEAGDDITLYYSGPKADAPEKADLLESDDTIFRSGFVDLCRGGHVDTPNKDISADSFTLDTVAGAYWRGDEDNQMLTRIYGLAFATEDDLDEFVVNRKKAKKRDHRTLGQELDLFTFSDNVGPGLPMLLPNGEIIRNELETYLNNIKEKHDYQFVNIPHIAKRKLYEKSGHMGKYDAMMPTFTDDSNTEYVMKAMNCPHHFEIYNSRQKSYRDLPLRIAENTTVYRNEKSGELHGLTRVINLMQDDAHHFIRPDQINDEIQMILDIMENVYGTLGFGDYEIQISVRDADSDQKYFGDDKIWKRAESILVDAVNERDIPYEKVPGEAAFYGPKIDVMVSDALGRQWQLTTVQLDFVQPDNFDMTYTGEDGEDHQVVVIHAAILGSFERFMGVLIEHTGGDFPLWLSPTQVALLPVGDDHEAVTDDIAKNLESAGIRTVIYGPDESVGKRIRNVHENKVPLFGVVGDDEVDADEITVESRRDDIDDITTEIDGVAERIQELIDNTDN*