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sw_6_scaffold_785_30

Organism: SW_6_Halobacteriales_65_23

near complete RP 33 / 55 MC: 3 BSCG 27 / 51 MC: 3 ASCG 38 / 38 MC: 2
Location: comp(25963..26553)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD57_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 95.0
  • Bit_score: 104
  • Evalue 9.40e-20
Putative RNA-binding protein {ECO:0000313|EMBL:EMA55176.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 95.0
  • Bit_score: 104
  • Evalue 1.30e-19
SSU processome protein utp24 similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 108.0
  • Bit_score: 103
  • Evalue 7.70e-20

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 591
ATGACACGCGTCCTGCTCGATGCGAACGCGCTGATGATGCCGGTCGAACTCGGCGTTCGAATCTTCGACGAGCTCGATCGGCTGCTCGGCGATCCCGAGGAGCCGTCCGGCCCGACCGGAGTGCCGATACAGGCCTCGATACACCGTGATTCGAGCGCAGAGCGGTCGGCGGCGACCGGCGGCGACCCGGACCGAACTCCTGGTCCCGATCCCAGCCCCGAATCCGACTCCGGTCCCGCCGGTCGCGGTGCCGGCGGAACCGAGAGCGACGCGAACCGGACCCCGGTCGACGGCGTGACGCTACTGGTGCCGACGGCCGTTCGTCGGGAACTCGACGACCTGTCGGGCGGCCATAGCGAAGCGGAAGTCGCGGCGAGCGTCGGCGCGGACTTGGCCGGCGAGCGCTGTCGGGAACTCCCCCACGAGGCGAGCTATGCCGACGACGCGATCGTCGAACTCGCAACCGATCGGCGGGCGGTTATCGACTACGTCCTGACGAACGATCGGGCGCTACGCGAACGCCTGTCTGCCCGAGGCGTTCCAGTAATCTGTTTACGTGGGCACGACCAACTGACGATCACGAACCCGTAA
PROTEIN sequence
Length: 197
MTRVLLDANALMMPVELGVRIFDELDRLLGDPEEPSGPTGVPIQASIHRDSSAERSAATGGDPDRTPGPDPSPESDSGPAGRGAGGTESDANRTPVDGVTLLVPTAVRRELDDLSGGHSEAEVAASVGADLAGERCRELPHEASYADDAIVELATDRRAVIDYVLTNDRALRERLSARGVPVICLRGHDQLTITNP*