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sw_6_scaffold_1316_4

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: 3817..5487

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1227456 species="Archaea; Eurya similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 558.0
  • Bit_score: 888
  • Evalue 5.20e-255
DNA-directed DNA polymerase (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 557.0
  • Bit_score: 769
  • Evalue 9.30e-220
DNA polymerase II small subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAW7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 558.0
  • Bit_score: 889
  • Evalue 1.30e-255

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1671
GTGCCGCGCCCGACACCGGCCGAGGTCGTGAACGAGCTCGCCACGAGGGGCTACAACGCCGAGCGCGAGGCCGTGACCCTGCTCGCGCGAGCGAACGACCTCGAAAACGCGATCGAGCGCGCGACCGAGACCGTCCCGGACGGGACGCTCACCCTCTCGGCCGACGACGTCGAGGCCGCCGTCCGAACCGCCGACCTCGCCGACGCCACCGGTCCGCCTCCCGATCACACCGACGGTTCGCCGCCAGGCGCTCGCGGCGACTCAGCCGCCGCCACCCCCACCGATGCCGCCGATTCCGGCAGCATTTCGGCCAAAACCCCCGATCAGCCCCGCTCCAACCCCTCCGTTTCGAGTGGAACGACAACCCACGAGACCGACGGTCAAACCGACTCTCCAGTGGAAACGAAGGGGTCGACGGAAAGCGGGACAGCCGAGAGCGGAACCACCGAGCGCTCCGTAGACCCGGATCTCCGTTCGCTCGACGTACAAGGCGACGTCACCGGCCGGAGCACCGGCACGGGCGAGTACGCCGATTTCGTTGCGACGTTCCGGGACCGATACGAACGCCTCTCCGGCCTCCTGCGCTCGCGGGTCAACCACCGACCGACCGAGGCGGTCGACGCGATGGCAGGCGGGAGCGACGCCGCCATCGTGGGGATGATCACGGACATCCGCTCGACCGCGAACGGTCACTGGTTGGTCGAACTCGAAGACACGACCGGAACGTTTCCCTGTCTCGTCCTCAAGGACCGCGAGATCGCAAGCGTCGTCGACGAACTCCTGCTCGACGAACTCGTCGCGGTCGAGGGCACGCTCGCGGGCGACGGGGGCATCCTGTTCGTCGACGAACTCCACTTCCCCGACGTTCCCCGGACGTACCGCCCTTCGACCGCCGACCGCCACGTTCGCGCGGCGCTCATCTCCGACGTCCACGTCGGCAGTCGGGAGTTCGCGACCGATGCGTGGTCGGCCTTCGCCGACTGGCTTCACACTGAGGACGCAGCAGCGGTCGAGTATCTCCTCGTTGCGGGCGACGTGGTCGAAGGGGTCGGGGTCTACCCGGATCAGGACGAGGAGCTCGACATCGTCGACATCTACAACCAGTACGAGGCCTTTGCCGAACGGTTGAAGGAGGTGCCTGGCGACATCGAGATCCTCCTGATCCCGGGCAACCACGACGCCGTCCGGCTCGCCGAACCACAGCCGGGCTTCGACGAGGAACTCCGTGGGATCATGGAGGCCCACGACGCGCGCTTCTCAGGCAACCCCTCGACCGTCACGATCGAGGGCGTCACGATACTGATGTACCACGGCGTCAGCCTCGACGAGGTGATCGCCGAACTCCCGAAAGAGAAGGCCAACTACGACGAACCCCACAAGGCGATGTACCAGCTCCTCAAGAAACGTCACGTCGCGCCCCAGTACGGCGGCCACACCAGGCTCGCCCCCGAAGAGCGTGACTACCTCGTGATGGAGGAGATCCCAGATGTCTTTCATACTGGTCACGTCCACAAGCTCGGCTACGGCAAGTACCACAACGTGCTCGCGATCAACTCGGGCTGCTGGCAGGAACAGACGTCCTTCCAGCGCAGCGTCAACATCGATCCCGACGTTGGCTACGCGCCAATCCTCGACCTCGACACGCTCGATCTGACGATCCAGAAGTTCTAA
PROTEIN sequence
Length: 557
VPRPTPAEVVNELATRGYNAEREAVTLLARANDLENAIERATETVPDGTLTLSADDVEAAVRTADLADATGPPPDHTDGSPPGARGDSAAATPTDAADSGSISAKTPDQPRSNPSVSSGTTTHETDGQTDSPVETKGSTESGTAESGTTERSVDPDLRSLDVQGDVTGRSTGTGEYADFVATFRDRYERLSGLLRSRVNHRPTEAVDAMAGGSDAAIVGMITDIRSTANGHWLVELEDTTGTFPCLVLKDREIASVVDELLLDELVAVEGTLAGDGGILFVDELHFPDVPRTYRPSTADRHVRAALISDVHVGSREFATDAWSAFADWLHTEDAAAVEYLLVAGDVVEGVGVYPDQDEELDIVDIYNQYEAFAERLKEVPGDIEILLIPGNHDAVRLAEPQPGFDEELRGIMEAHDARFSGNPSTVTIEGVTILMYHGVSLDEVIAELPKEKANYDEPHKAMYQLLKKRHVAPQYGGHTRLAPEERDYLVMEEIPDVFHTGHVHKLGYGKYHNVLAINSGCWQEQTSFQRSVNIDPDVGYAPILDLDTLDLTIQKF*