ggKbase home page

sw_6_scaffold_413_4

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(2370..3533)

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR92_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 387.0
  • Bit_score: 593
  • Evalue 1.70e-166
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA47878.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 387.0
  • Bit_score: 593
  • Evalue 2.40e-166
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 379.0
  • Bit_score: 332
  • Evalue 1.50e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1164
ATGAACCTCTTCGACTTCGCGAGACGGTTACAGGGGGCGTACTTCCAGACGTTCGGCGAGAAACTGCTCGGTACGATCGTGCTGTTCGCGCTGCTGGCGGTGATCGGCGAGGCCATCAGGCGGGCGGGCCGGCCGCTCAAACGACGCTACAGTTCGCGGCTGACCGAGGCGGTCCAGGCCGGCACGGTGACGGTGCTCGTCCTGTTCGTGGTCCTCGCGCTCGCCGTGATCTGGCACGTCACGGGGTTCGTACAGTTCCTCGTCAAGTCGTCGTCGATCAGCCGTTTCGACGCCGCTCGCGGACTGCTCACCGTCGCCGTTCTCGTGATCGCCTACCTCCTCGTCCGACTCATCAACCGCTCGATCGACCGGCTCTCGCTGGAACAGGACGTGATTTCCGACCACCAGAGCGAGGTCGCCTACCACGTCGCCGACGTCGGGGTGTTCGTGGTCGCGTTCGTGGCGATCCTCGGAATCTGGGGCATCGATCCGGGCCAGTTGTTCGTCGGCGCGGGCGTGCTCGGCGCGGTGCTCGGGTACGCGGCCCGGGGCACGCTCAGCGCGATCATCGCCGGGTTCGTGTTGCTGTTCTCGCGACCGTTCCGGGTGGGCGACTGGATCATCATCGAGGAGTACGAGGGGGTGGTCCGGGAGGTCACCATCGTCAACACCAAGATCCGGACGTTCGACGACGAGCACGTGCTGATCCCGAACGACGAGATCACCAACAACTTCCTCGTCAACCGCACGCGGAACAACCGATACCGGGTCGACATCGACGTGAGCGTGGACTACGACACCGACCTCGGCGAGGCGATGGACGTGACGACGGACGCGATGGAAGGGTGTGACGACCGGATCAGAGAGCAGCCCTCGCCGCGGGCGGTGTTGAAACGCTTTGCGGACTCGGGGATCGTCCTCGAACTCCGCTTTTGGGTCGACAACCCGAGCGCGAGGCGCGTCTGGGAGGCGAGGAGCGCCGTCGTGCAGTCGGTGAAGGAAGCCTTCGACCGCGAGGGGATCGTCATCCCGTTCCCCCAGCGCACGCTCAACGCGAGGGAGCAGTCGGGGTTCGGCGTCGCCGATCGCGGCGTGTCCGAGCGCAGCGGGGCGGGCGAGCGAGCGCCGGGGTCGACCACGGCGACCGACGGCGGCGAGGACTGA
PROTEIN sequence
Length: 388
MNLFDFARRLQGAYFQTFGEKLLGTIVLFALLAVIGEAIRRAGRPLKRRYSSRLTEAVQAGTVTVLVLFVVLALAVIWHVTGFVQFLVKSSSISRFDAARGLLTVAVLVIAYLLVRLINRSIDRLSLEQDVISDHQSEVAYHVADVGVFVVAFVAILGIWGIDPGQLFVGAGVLGAVLGYAARGTLSAIIAGFVLLFSRPFRVGDWIIIEEYEGVVREVTIVNTKIRTFDDEHVLIPNDEITNNFLVNRTRNNRYRVDIDVSVDYDTDLGEAMDVTTDAMEGCDDRIREQPSPRAVLKRFADSGIVLELRFWVDNPSARRVWEARSAVVQSVKEAFDREGIVIPFPQRTLNAREQSGFGVADRGVSERSGAGERAPGSTTATDGGED*